RNA–Protein interactions for RNA: ENSMUST00000017290.10

Brca1-201, Transcript of Breast cancer type 1 susceptibility protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Brca1, Length 6,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1-201ENSMUST00000017290 Setd2E9Q5F9 2537 aa4.72□□□□□ -1.65
Brca1-201ENSMUST00000017290 Nsd1O88491 2588 aaKnown RBP4.72□□□□□ -1.65
Brca1-201ENSMUST00000017290 Sptbn4E9PX29 2561 aa4.71□□□□□ -1.65
Brca1-201ENSMUST00000017290 Piezo1E2JF22 2547 aa4.71□□□□□ -1.65
Brca1-201ENSMUST00000017290 Gm2310J3QNJ2 377 aa4.69□□□□□ -1.66
Brca1-201ENSMUST00000017290 Wdfy3Q6VNB8 3508 aa4.69□□□□□ -1.66
Brca1-201ENSMUST00000017290 TrrapQ80YV3 2565 aaKnown RBP4.66□□□□□ -1.66
Brca1-201ENSMUST00000017290 HrnrQ8VHD8 2496 aa4.65□□□□□ -1.66
Brca1-201ENSMUST00000017290 Tnp2P11378 117 aa4.65□□□□□ -1.67
Brca1-201ENSMUST00000017290 Nbeal1E9PYP2 2688 aa4.65□□□□□ -1.67
Brca1-201ENSMUST00000017290 CicQ924A2 2510 aa4.64□□□□□ -1.67
Brca1-201ENSMUST00000017290 Lama3Q61789 3330 aa4.63□□□□□ -1.67
Brca1-201ENSMUST00000017290 Gm9918Q8BUR5 174 aa4.62□□□□□ -1.67
Brca1-201ENSMUST00000017290 MtorQ9JLN9 2549 aa4.61□□□□□ -1.67
Brca1-201ENSMUST00000017290 D6Ertd527eA0A0N4SWI3 464 aa4.6□□□□□ -1.67
Brca1-201ENSMUST00000017290 Unc80Q8BLN6 3261 aa4.6□□□□□ -1.67
Brca1-201ENSMUST00000017290 Usp9xP70398 2559 aaKnown RBP4.59□□□□□ -1.67
Brca1-201ENSMUST00000017290 Gm2696A0A1W2P709 240 aa4.59□□□□□ -1.67
Brca1-201ENSMUST00000017290 Ankrd17Q99NH0 2603 aaKnown RBP4.58□□□□□ -1.68
Brca1-201ENSMUST00000017290 Gm40193A0A1B0GT39 78 aa4.57□□□□□ -1.68
Brca1-201ENSMUST00000017290 Usp9yF8VPU6 2556 aa4.55□□□□□ -1.68
Brca1-201ENSMUST00000017290 Prm2P07978 107 aa4.55□□□□□ -1.68
Brca1-201ENSMUST00000017290 Chd8Q09XV5 2582 aaKnown RBP4.53□□□□□ -1.68
Brca1-201ENSMUST00000017290 Rps29P62274 56 aa4.53□□□□□ -1.68
Brca1-201ENSMUST00000017290 Brca2P97929 3329 aa4.53□□□□□ -1.68
Brca1-201ENSMUST00000017290 SmcpP15265 143 aa4.5□□□□□ -1.69
Brca1-201ENSMUST00000017290 Csmd2V9GX34 3611 aa4.49□□□□□ -1.69
Brca1-201ENSMUST00000017290 Usp24B1AY13 2617 aaKnown RBP4.48□□□□□ -1.69
Brca1-201ENSMUST00000017290 Bahcc1Q3UHR0 2643 aa4.47□□□□□ -1.69
Brca1-201ENSMUST00000017290 DmdP11531 3678 aa4.47□□□□□ -1.69
Brca1-201ENSMUST00000017290 Cdh23Q99PF4 3354 aa4.45□□□□□ -1.7
Brca1-201ENSMUST00000017290 4933428G20RikQ9D3X4 101 aa4.45□□□□□ -1.7
Brca1-201ENSMUST00000017290 FasnP19096 2504 aaKnown RBP4.45□□□□□ -1.7
Brca1-201ENSMUST00000017290 SetxA2AKX3 2646 aa4.44□□□□□ -1.7
Brca1-201ENSMUST00000017290 Gm20537G3UYK7 97 aa4.44□□□□□ -1.7
Brca1-201ENSMUST00000017290 B930094E09RikQ8C4T2 136 aa4.43□□□□□ -1.7
Brca1-201ENSMUST00000017290 Ep400Q8CHI8 3072 aaKnown RBP4.41□□□□□ -1.7
Brca1-201ENSMUST00000017290 Szt2A2A9C3 3431 aa4.39□□□□□ -1.71
Brca1-201ENSMUST00000017290 2310061N02RikQ9D6S9 174 aa4.38□□□□□ -1.71
Brca1-201ENSMUST00000017290 SpenQ62504 3644 aaKnown RBP4.37□□□□□ -1.71
Brca1-201ENSMUST00000017290 Notch1Q01705 2531 aa4.37□□□□□ -1.71
Brca1-201ENSMUST00000017290 Muc5acE9QAQ8 3455 aa4.35□□□□□ -1.71
Brca1-201ENSMUST00000017290 A930033H14RikG5E8X6 103 aa4.35□□□□□ -1.71
Brca1-201ENSMUST00000017290 Dchs2A0A0A6YW72 3346 aa4.34□□□□□ -1.71
Brca1-201ENSMUST00000017290 Jbts17Q8CE72 3214 aa4.33□□□□□ -1.72
Brca1-201ENSMUST00000017290 Fn1P11276 2477 aaKnown RBP4.33□□□□□ -1.72
Brca1-201ENSMUST00000017290 Col6a3E9PWQ3 3284 aa4.32□□□□□ -1.72
Brca1-201ENSMUST00000017290 Ankrd11E9Q4F7 2643 aa4.32□□□□□ -1.72
Brca1-201ENSMUST00000017290 Abca12E9Q876 2595 aa4.31□□□□□ -1.72
Brca1-201ENSMUST00000017290 Gm11565A2A4M7 156 aa4.31□□□□□ -1.72
Brca1-201ENSMUST00000017290 HttP42859 3119 aa4.31□□□□□ -1.72
Brca1-201ENSMUST00000017290 Lrrc37aB1AWG4 3215 aa4.3□□□□□ -1.72
Brca1-201ENSMUST00000017290 VcanQ62059 3357 aa4.3□□□□□ -1.72
Brca1-201ENSMUST00000017290 Gm9195A0A140LHT4 2805 aa4.29□□□□□ -1.72
Brca1-201ENSMUST00000017290 Lama2Q60675 3118 aaKnown RBP4.28□□□□□ -1.72
Brca1-201ENSMUST00000017290 Gm10318A0A1W2P728 225 aa4.28□□□□□ -1.72
Brca1-201ENSMUST00000017290 Unc79Q0KK59 2596 aa4.27□□□□□ -1.73
Brca1-201ENSMUST00000017290 Map1aQ9QYR6 2776 aa4.24□□□□□ -1.73
Brca1-201ENSMUST00000017290 Bod1lE9Q6J5 3032 aa4.23□□□□□ -1.73
Brca1-201ENSMUST00000017290 Gm42715A0A087WP63 3095 aaKnown RBP4.22□□□□□ -1.73
Brca1-201ENSMUST00000017290 Gm9736A0A1W2P7N1 277 aa4.22□□□□□ -1.73
Brca1-201ENSMUST00000017290 PcntP48725 2898 aa4.22□□□□□ -1.73
Brca1-201ENSMUST00000017290 AtrQ9JKK8 2635 aa4.22□□□□□ -1.73
Brca1-201ENSMUST00000017290 Vps13aQ5H8C4 3166 aa4.21□□□□□ -1.74
Brca1-201ENSMUST00000017290 Myo18bE9PV66 2605 aa4.2□□□□□ -1.74
Brca1-201ENSMUST00000017290 Myo15aQ9QZZ4 3511 aa4.19□□□□□ -1.74
Brca1-201ENSMUST00000017290 Zfp292Q9Z2U2 2698 aa4.18□□□□□ -1.74
Brca1-201ENSMUST00000017290 CenpfE9Q3P4 2997 aaKnown RBP4.18□□□□□ -1.74
Brca1-201ENSMUST00000017290 Zfhx4Q9JJN2 3550 aa4.18□□□□□ -1.74
Brca1-201ENSMUST00000017290 NipblQ6KCD5 2798 aaKnown RBP4.17□□□□□ -1.74
Brca1-201ENSMUST00000017290 FlnaQ8BTM8 2647 aaKnown RBP4.16□□□□□ -1.74
Brca1-201ENSMUST00000017290 Gcn1E9PVA8 2671 aaKnown RBP4.16□□□□□ -1.74
Brca1-201ENSMUST00000017290 Stab1Q8R4Y4 2571 aa4.14□□□□□ -1.75
Brca1-201ENSMUST00000017290 Gm19668J3QMD1 248 aa4.11□□□□□ -1.75
Brca1-201ENSMUST00000017290 Dnah12Q3V0Q1 3086 aa4.11□□□□□ -1.75
Brca1-201ENSMUST00000017290 Kmt2bO08550 2713 aa4.11□□□□□ -1.75
Brca1-201ENSMUST00000017290 Cep350E9Q309 3095 aa4.11□□□□□ -1.75
Brca1-201ENSMUST00000017290 Gm6358A0A087WPH4 74 aa4.11□□□□□ -1.75
Brca1-201ENSMUST00000017290 Prrc2cQ3TLH4 2846 aaKnown RBP4.09□□□□□ -1.75
Brca1-201ENSMUST00000017290 FlnbQ80X90 2602 aaKnown RBP4.09□□□□□ -1.75
Brca1-201ENSMUST00000017290 Hectd1Q69ZR2 2618 aaKnown RBP4.09□□□□□ -1.76
Brca1-201ENSMUST00000017290 SpegQ62407 3262 aa4.07□□□□□ -1.76
Brca1-201ENSMUST00000017290 Crct1Q6PAI5 102 aa4.06□□□□□ -1.76
Brca1-201ENSMUST00000017290 Dmxl1Q6PNC0 3013 aa4.06□□□□□ -1.76
Brca1-201ENSMUST00000017290 Cfap54Q8C6S9 3106 aa4.04□□□□□ -1.76
Brca1-201ENSMUST00000017290 Gm884A2A9H6 3643 aa4.04□□□□□ -1.76
Brca1-201ENSMUST00000017290 2310079G19RikQ9D6L6 185 aa4.03□□□□□ -1.76
Brca1-201ENSMUST00000017290 9530053A07RikE9PVG8 2581 aa4.03□□□□□ -1.76
Brca1-201ENSMUST00000017290 Akap13E9Q394 2776 aa4.02□□□□□ -1.77
Brca1-201ENSMUST00000017290 AspmQ8CJ27 3122 aa4.01□□□□□ -1.77
Brca1-201ENSMUST00000017290 Celsr1O35161 3034 aa4.01□□□□□ -1.77
Brca1-201ENSMUST00000017290 Frem2Q6NVD0 3160 aa4□□□□□ -1.77
Brca1-201ENSMUST00000017290 Prune2Q52KR3 3084 aa3.99□□□□□ -1.77
Brca1-201ENSMUST00000017290 Igsf10Q3V1M1 2594 aa3.99□□□□□ -1.77
Brca1-201ENSMUST00000017290 Gm17402F6Z0L5 76 aa3.98□□□□□ -1.77
Brca1-201ENSMUST00000017290 2210017I01RikA0A0A6YVV1 95 aa3.98□□□□□ -1.77
Brca1-201ENSMUST00000017290 Stab2Q8R4U0 2559 aa3.96□□□□□ -1.78
Brca1-201ENSMUST00000017290 TrioQ0KL02 3102 aa3.95□□□□□ -1.78
Brca1-201ENSMUST00000017290 Tep1P97499 2629 aa3.95□□□□□ -1.78
Brca1-201ENSMUST00000017290 Gm17416Q30KP4 66 aa3.95□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms