RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 CnbpP53996 178 aaKnown RBP8.39□□□□□ -1.07
Msh6-201ENSMUST00000005503 Ndufb1P0DN34 57 aa8.38□□□□□ -1.07
Msh6-201ENSMUST00000005503 Smim29Q8R043 75 aa8.38□□□□□ -1.07
Msh6-201ENSMUST00000005503 Wfdc3Q14AE4 130 aa8.38□□□□□ -1.07
Msh6-201ENSMUST00000005503 Gm11627A6PWP4 55 aa8.37□□□□□ -1.07
Msh6-201ENSMUST00000005503 Gm16181B0V2H2 73 aa8.36□□□□□ -1.07
Msh6-201ENSMUST00000005503 H2al1kJ3QP08 105 aa8.35□□□□□ -1.07
Msh6-201ENSMUST00000005503 H2al1mQ9DAD9 105 aa8.35□□□□□ -1.07
Msh6-201ENSMUST00000005503 Q8BT88 171 aa8.35□□□□□ -1.07
Msh6-201ENSMUST00000005503 Cdc42se1Q8BHL7 80 aa8.34□□□□□ -1.07
Msh6-201ENSMUST00000005503 Q8K1L6 76 aa8.34□□□□□ -1.07
Msh6-201ENSMUST00000005503 Muc5acE9QAQ8 3455 aa8.33□□□□□ -1.08
Msh6-201ENSMUST00000005503 Igsf10Q3V1M1 2594 aa8.33□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm884A2A9H6 3643 aa8.33□□□□□ -1.08
Msh6-201ENSMUST00000005503 Coa5Q99M07 74 aa8.32□□□□□ -1.08
Msh6-201ENSMUST00000005503 Stab2Q8R4U0 2559 aa8.32□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm11213A0A1B0GR83 88 aa8.32□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm10160F6Y577 67 aa8.32□□□□□ -1.08
Msh6-201ENSMUST00000005503 AI606181Q8C7B9 129 aa8.32□□□□□ -1.08
Msh6-201ENSMUST00000005503 Phf5aP83870 110 aaKnown RBP8.31□□□□□ -1.08
Msh6-201ENSMUST00000005503 Adm2Q7TNK8 150 aa8.3□□□□□ -1.08
Msh6-201ENSMUST00000005503 1600014C23RikQ9DAX4 101 aa8.3□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm7138L7N2C3 230 aa8.29□□□□□ -1.08
Msh6-201ENSMUST00000005503 Znf414Q9DCK4 299 aa8.29□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm3238W4VSP7 230 aa8.29□□□□□ -1.08
Msh6-201ENSMUST00000005503 AplnQ9R0R4 77 aa8.29□□□□□ -1.08
Msh6-201ENSMUST00000005503 Bean1Q9EQG5 255 aa8.29□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm10642Q3TWM1 71 aa8.29□□□□□ -1.08
Msh6-201ENSMUST00000005503 SmcpP15265 143 aa8.28□□□□□ -1.08
Msh6-201ENSMUST00000005503 P84750 121 aa8.28□□□□□ -1.08
Msh6-201ENSMUST00000005503 Gm4707V9GXN5 68 aa8.27□□□□□ -1.09
Msh6-201ENSMUST00000005503 Lama5Q61001 3718 aa8.27□□□□□ -1.09
Msh6-201ENSMUST00000005503 Sec61gP60060 68 aa8.26□□□□□ -1.09
Msh6-201ENSMUST00000005503 Chchd10Q7TNL9 138 aa8.26□□□□□ -1.09
Msh6-201ENSMUST00000005503 Ccdc179J3QM76 67 aa8.26□□□□□ -1.09
Msh6-201ENSMUST00000005503 Prol1E9PYQ4 312 aa8.26□□□□□ -1.09
Msh6-201ENSMUST00000005503 Defb39Q70KL3 74 aa8.26□□□□□ -1.09
Msh6-201ENSMUST00000005503 Gm28374F6SG70 93 aa8.25□□□□□ -1.09
Msh6-201ENSMUST00000005503 Gm10837Q3UTT8 145 aa8.25□□□□□ -1.09
Msh6-201ENSMUST00000005503 A930002H24RikQ8C8Y3 163 aa8.24□□□□□ -1.09
Msh6-201ENSMUST00000005503 Gm7276Q3TYW4 209 aa8.24□□□□□ -1.09
Msh6-201ENSMUST00000005503 ApcQ61315 2845 aa8.23□□□□□ -1.09
Msh6-201ENSMUST00000005503 Gm7137J3QMW1 236 aa8.23□□□□□ -1.09
Msh6-201ENSMUST00000005503 Znf706Q9D115 76 aaKnown RBP8.23□□□□□ -1.09
Msh6-201ENSMUST00000005503 Wfdc17Q5SSJ1 76 aa8.22□□□□□ -1.09
Msh6-201ENSMUST00000005503 Pdzd2E9Q1M1 2796 aa8.22□□□□□ -1.09
Msh6-201ENSMUST00000005503 A730071L15RikQ8C4X0 137 aa8.21□□□□□ -1.09
Msh6-201ENSMUST00000005503 Tenm3Q9WTS6 2715 aa8.2□□□□□ -1.1
Msh6-201ENSMUST00000005503 Gm11565A2A4M7 156 aa8.18□□□□□ -1.1
Msh6-201ENSMUST00000005503 Muc4Q8JZM8 3443 aa8.18□□□□□ -1.1
Msh6-201ENSMUST00000005503 9530053A07RikE9PVG8 2581 aa8.17□□□□□ -1.1
Msh6-201ENSMUST00000005503 Phxr4P15974 95 aa8.17□□□□□ -1.1
Msh6-201ENSMUST00000005503 Gm20661K7N787 53 aa8.17□□□□□ -1.1
Msh6-201ENSMUST00000005503 Defb10Q8R2I8 73 aa8.16□□□□□ -1.1
Msh6-201ENSMUST00000005503 Svep1A2AVA0 3567 aa8.16□□□□□ -1.1
Msh6-201ENSMUST00000005503 Chtf8P0CG14 533 aa8.15□□□□□ -1.1
Msh6-201ENSMUST00000005503 Itpr2Q9Z329 2701 aa8.15□□□□□ -1.11
Msh6-201ENSMUST00000005503 Ly6g6cQ9Z1Q4 126 aa8.14□□□□□ -1.11
Msh6-201ENSMUST00000005503 Gm10999F6Q4M4 69 aa8.09□□□□□ -1.11
Msh6-201ENSMUST00000005503 Anapc11Q9CPX9 84 aa8.09□□□□□ -1.11
Msh6-201ENSMUST00000005503 TgO08710 2766 aa8.07□□□□□ -1.12
Msh6-201ENSMUST00000005503 Spaca4Q80ZQ0 127 aa8.06□□□□□ -1.12
Msh6-201ENSMUST00000005503 Zcchc13Q9D548 170 aa8.06□□□□□ -1.12
Msh6-201ENSMUST00000005503 Gm27235Q3UW50 83 aa8.06□□□□□ -1.12
Msh6-201ENSMUST00000005503 Defb1P56386 69 aa8.05□□□□□ -1.12
Msh6-201ENSMUST00000005503 Defb9Q8R2I6 67 aa8.05□□□□□ -1.12
Msh6-201ENSMUST00000005503 Cmya5Q70KF4 3739 aa8.04□□□□□ -1.12
Msh6-201ENSMUST00000005503 Plac8Q9JI48 112 aa8.03□□□□□ -1.12
Msh6-201ENSMUST00000005503 Limd2Q8BGB5 128 aa8.02□□□□□ -1.13
Msh6-201ENSMUST00000005503 Fam104aA2A6P4 185 aa8.02□□□□□ -1.13
Msh6-201ENSMUST00000005503 Phxr5P08399 672 aa8.02□□□□□ -1.13
Msh6-201ENSMUST00000005503 Gm9508A0A1W2P7W0 230 aa8□□□□□ -1.13
Msh6-201ENSMUST00000005503 Spata3Q9D9T6 193 aa7.99□□□□□ -1.13
Msh6-201ENSMUST00000005503 Srrm2Q8BTI8 2703 aaKnown RBP7.99□□□□□ -1.13
Msh6-201ENSMUST00000005503 Gpr15lA0A0B4J1N3 78 aa7.98□□□□□ -1.13
Msh6-201ENSMUST00000005503 Q8BGJ3 129 aa7.96□□□□□ -1.14
Msh6-201ENSMUST00000005503 OtogO55225 2910 aa7.95□□□□□ -1.14
Msh6-201ENSMUST00000005503 Gm36176A0A1W2P8D5 158 aa7.94□□□□□ -1.14
Msh6-201ENSMUST00000005503 Sprr1aQ62266 144 aa7.91□□□□□ -1.14
Msh6-201ENSMUST00000005503 Cypt15B1AXS0 87 aa7.88□□□□□ -1.15
Msh6-201ENSMUST00000005503 Gm10643Q3URG9 111 aa7.85□□□□□ -1.15
Msh6-201ENSMUST00000005503 Uqcr11Q9CPX8 56 aa7.85□□□□□ -1.15
Msh6-201ENSMUST00000005503 Gm10139O88245 57 aa7.83□□□□□ -1.16
Msh6-201ENSMUST00000005503 Odf3bQ5M8M2 238 aa7.81□□□□□ -1.16
Msh6-201ENSMUST00000005503 4930507D05RikQ8C9C9 103 aa7.79□□□□□ -1.16
Msh6-201ENSMUST00000005503 6030445D17RikE9Q8F9 148 aa7.79□□□□□ -1.16
Msh6-201ENSMUST00000005503 Gm21798J3QNU5 87 aa7.78□□□□□ -1.16
Msh6-201ENSMUST00000005503 Gm37013Q8K491 104 aa7.75□□□□□ -1.17
Msh6-201ENSMUST00000005503 RetnlbQ99P86 105 aa7.75□□□□□ -1.17
Msh6-201ENSMUST00000005503 2310034C09RikQ9D746 214 aa7.74□□□□□ -1.17
Msh6-201ENSMUST00000005503 FcgbpE9Q0B5 2583 aa7.73□□□□□ -1.17
Msh6-201ENSMUST00000005503 Cypt14J3QPF7 87 aa7.72□□□□□ -1.17
Msh6-201ENSMUST00000005503 Gm3646F6S692 53 aa7.7□□□□□ -1.18
Msh6-201ENSMUST00000005503 4933415A04RikQ9D443 101 aa7.69□□□□□ -1.18
Msh6-201ENSMUST00000005503 Tenm4Q3UHK6 2771 aa7.69□□□□□ -1.18
Msh6-201ENSMUST00000005503 AW011738F6S7Q2 159 aa7.68□□□□□ -1.18
Msh6-201ENSMUST00000005503 Gm10065F6TJM2 114 aa7.68□□□□□ -1.18
Msh6-201ENSMUST00000005503 NbdyA0A0N4SUI7 68 aa7.67□□□□□ -1.18
Msh6-201ENSMUST00000005503 Defb11Q8R2I7 77 aa7.66□□□□□ -1.18
Msh6-201ENSMUST00000005503 Tenm1Q9WTS4 2731 aa7.66□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 103.1 ms