RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Phxr5P08399 672 aa6.56□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Ube2aQ9Z255 152 aa6.55□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Trav13-2A0A075B649 110 aa6.55□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Fam19a1Q7TPG8 133 aa6.55□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Gm10647E9Q8X0 124 aa6.54□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Sostdc1Q9CQN4 206 aa6.54□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Hivep1Q03172 2688 aa6.54□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 7530416G11RikJ3QJX6 159 aa6.54□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Reg3dQ9QUS9 175 aa6.53□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Fn1P11276 2477 aaKnown RBP6.53□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Obox2E9PXV9 151 aa6.53□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 2010109I03RikQ9CQ11 111 aa6.53□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Gm36176A0A1W2P8D5 158 aa6.53□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Fbn1Q61554 2873 aaKnown RBP6.53□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Helz2E9QAM5 2947 aaKnown RBP6.52□□□□□ -1.36
Sh3rf1-202ENSMUST00000209611 Prr15lQ8JZM2 100 aa6.52□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Gm16181B0V2H2 73 aa6.52□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 6430550D23RikE9Q1X6 194 aa6.52□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Gm10518F6UQQ9 182 aa6.52□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Ndufc1Q9CQY9 76 aa6.52□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Tex15F8VPN2 2785 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Sprr1bQ62267 153 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Defb50Q6TU36 73 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Snhg11Q4G0K9 87 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Col6a5A6H584 2640 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Tenm4Q3UHK6 2771 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Cox7b2Q9D2H1 82 aa6.51□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Igsf10Q3V1M1 2594 aa6.5□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Gm7137J3QMW1 236 aa6.5□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Tcl1b3P56842 122 aa6.5□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Nbeal2Q6ZQA0 2742 aa6.5□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Gm10549Q3URY4 149 aa6.49□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Gm10570F6VB42 170 aa6.49□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 E130208F15RikQ3UPV3 143 aa6.49□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 UqcrqQ9CQ69 82 aa6.49□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Kmt2aP55200 3966 aa6.49□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Cdk2ap2Q9CPY4 127 aa6.49□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Klk12B2RVZ0 247 aa6.48□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Tcl1b5P56845 121 aa6.48□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Ighv1-56A0A0A6YXG2 117 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 P06320 134 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Igkv8-18A0A0B4J1J3 123 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Krtap11-1E9Q2E9 183 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Camk2n2Q78WH7 79 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Wfdc12Q9JHY3 85 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Rpl28P41105 137 aaKnown RBP6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Eif4ebp3Q80VV3 101 aa6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Znf706Q9D115 76 aaKnown RBP6.47□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Notch1Q01705 2531 aa6.46□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 AplnQ9R0R4 77 aa6.46□□□□□ -1.37
Sh3rf1-202ENSMUST00000209611 Ufsp1Q9CZP0 217 aa6.46□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Igkv1-117A0A140T8M0 119 aa6.45□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Ighv2-9A0A075B5Q5 116 aa6.44□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 A0A286YCN5 57 aa6.43□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Ube2d4D3YUH6 135 aa6.43□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Rpl39lQ9CQD0 51 aa6.43□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Igkv3-2A0A075B5P0 119 aa6.43□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm17509Q9CZ61 145 aa6.43□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Cox7bP56393 80 aa6.42□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm17577J3QNF7 156 aa6.42□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 B9d2Q3UK10 175 aa6.42□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm16485Q8C4B7 115 aa6.42□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Tenm1Q9WTS4 2731 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm17521F6QAC8 156 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 C530025M09RikF6RGA8 229 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm5142Q8C5X9 133 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 FasnP19096 2504 aaKnown RBP6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Igkv1-88A0A140T8N1 120 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Wfdc10Q3V2J9 124 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm11011D3Z3L9 86 aa6.41□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm10837Q3UTT8 145 aa6.4□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Gm9903Q8C9Y8 129 aa6.4□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Igkv4-92A0A0B4J1I2 117 aa6.4□□□□□ -1.38
Sh3rf1-202ENSMUST00000209611 Srrm2Q8BTI8 2703 aaKnown RBP6.4□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Igkv1-122A0A140T8M9 119 aa6.39□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Defb11Q8R2I7 77 aa6.39□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 A730009L09RikA0A1B0GS82 72 aa6.39□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Gm9805F6YK59 57 aa6.39□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Fam19a3Q7TPG6 132 aa6.39□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 4930524J08RikQ9CUJ5 163 aa6.39□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Dnah3Q8BW94 4083 aa6.38□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 4930519P11RikQ9CUJ8 166 aa6.37□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Defb38Q7TNV7 63 aa6.36□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 1810062G17RikG3X8Y2 129 aa6.36□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Ighv10-1A0A0B4J1J6 119 aa6.35□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Ndufb1P0DN34 57 aa6.35□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 SmcpP15265 143 aa6.35□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 AW011738F6S7Q2 159 aa6.34□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 A0A286YE49 62 aa6.34□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Vpreb3D3Z6J4 130 aa6.34□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 ApcQ61315 2845 aa6.34□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Dnah6E9Q0B6 4144 aa6.34□□□□□ -1.39
Sh3rf1-202ENSMUST00000209611 Sprr4Q8CGN8 76 aa6.33□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Ighv2-5A0A0A6YY69 116 aa6.33□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Gm10401E9Q3K6 71 aa6.33□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 AI606181Q8C7B9 129 aa6.33□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 Gm10845Q3UNY9 185 aa6.32□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 9530003J23RikQ8BM26 151 aa6.32□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 AY074887Q8R5F9 132 aa6.31□□□□□ -1.4
Sh3rf1-202ENSMUST00000209611 2310034G01RikA0A286YDL3 209 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 103.9 ms