RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Dnah1E9Q8T7 4250 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Tmem254aP0DN89 123 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Tmem254bP0DN90 123 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Tmem254cP0DN91 123 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Fam229bQ8CF36 80 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Muc6Q80T03 2850 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Igkv8-16A0A0G2JDG9 121 aa7.15□□□□□ -1.26
Lig3-212ENSMUST00000173727 Csmd3Q80T79 3707 aa7.15□□□□□ -1.27
Lig3-212ENSMUST00000173727 Tcl1b5P56845 121 aa7.15□□□□□ -1.27
Lig3-212ENSMUST00000173727 Ighv2-9A0A075B5Q5 116 aa7.14□□□□□ -1.27
Lig3-212ENSMUST00000173727 Gm5617Q91VN2 117 aa7.14□□□□□ -1.27
Lig3-212ENSMUST00000173727 Gm17509Q9CZ61 145 aa7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 Gm10845Q3UNY9 185 aa7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 2310061N02RikQ9D6S9 174 aa7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 Q9DAA7 145 aa7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 FasnP19096 2504 aaKnown RBP7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 Gm10518F6UQQ9 182 aa7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 Tmem258P61166 79 aa7.13□□□□□ -1.27
Lig3-212ENSMUST00000173727 A730009L09RikA0A1B0GS82 72 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 9430015G10RikA2ASP7 199 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Wfdc12Q9JHY3 85 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Megf8P60882 2789 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 GhrhP16043 103 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Gm9903Q8C9Y8 129 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Fam19a5Q91WE9 132 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 4930556J24RikQ9D4U7 146 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Igkv4-58A0A0G2JGI6 119 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Ube2d4D3YUH6 135 aa7.12□□□□□ -1.27
Lig3-212ENSMUST00000173727 Tcl1b3P56842 122 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 Camk2n2Q78WH7 79 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 SnurfQ9WU12 71 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 Dync2h1Q45VK7 4306 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 Igkv4-92A0A0B4J1I2 117 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 BikO70337 150 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 Ntn5Q3UQ22 452 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 Reg3dQ9QUS9 175 aa7.11□□□□□ -1.27
Lig3-212ENSMUST00000173727 E130218I03RikA0A0U1RNU5 63 aa7.1□□□□□ -1.27
Lig3-212ENSMUST00000173727 Igkv8-21A0A140T8P7 120 aa7.1□□□□□ -1.27
Lig3-212ENSMUST00000173727 Sprr4Q8CGN8 76 aa7.1□□□□□ -1.27
Lig3-212ENSMUST00000173727 Ufsp1Q9CZP0 217 aa7.1□□□□□ -1.27
Lig3-212ENSMUST00000173727 Tenm2Q9WTS5 2764 aa7.1□□□□□ -1.27
Lig3-212ENSMUST00000173727 A0A286YCN5 57 aa7.09□□□□□ -1.27
Lig3-212ENSMUST00000173727 Ubl5Q9EPV8 73 aa7.09□□□□□ -1.27
Lig3-212ENSMUST00000173727 Igkv8-18A0A0B4J1J3 123 aa7.09□□□□□ -1.27
Lig3-212ENSMUST00000173727 Ormdl1Q921I0 153 aa7.09□□□□□ -1.27
Lig3-212ENSMUST00000173727 Gm10320E9PW43 113 aa7.08□□□□□ -1.28
Lig3-212ENSMUST00000173727 Rps28P62858 69 aaKnown RBP7.08□□□□□ -1.28
Lig3-212ENSMUST00000173727 Gm19935A0A1B0GSF9 52 aa7.08□□□□□ -1.28
Lig3-212ENSMUST00000173727 Defa27F2Z403 93 aa7.08□□□□□ -1.28
Lig3-212ENSMUST00000173727 Trav14-1A0A0G2JF94 121 aa7.07□□□□□ -1.28
Lig3-212ENSMUST00000173727 Lamtor3O88653 124 aa7.07□□□□□ -1.28
Lig3-212ENSMUST00000173727 Fam19a3Q7TPG6 132 aa7.07□□□□□ -1.28
Lig3-212ENSMUST00000173727 Igkv8-27A0A0G2JF28 120 aa7.07□□□□□ -1.28
Lig3-212ENSMUST00000173727 Igkv8-30A0A140T8M3 121 aa7.07□□□□□ -1.28
Lig3-212ENSMUST00000173727 Gm5153P01627 120 aa7.07□□□□□ -1.28
Lig3-212ENSMUST00000173727 Cox7bP56393 80 aa7.06□□□□□ -1.28
Lig3-212ENSMUST00000173727 PrkdcP97313 4128 aa7.05□□□□□ -1.28
Lig3-212ENSMUST00000173727 Igkv3-12A0A140T8P0 119 aa7.05□□□□□ -1.28
Lig3-212ENSMUST00000173727 Gm17689B3GLJ4 109 aa7.05□□□□□ -1.28
Lig3-212ENSMUST00000173727 Gm9507D3Z5T3 223 aa7.04□□□□□ -1.28
Lig3-212ENSMUST00000173727 BaalcQ8VHV1 145 aa7.04□□□□□ -1.28
Lig3-212ENSMUST00000173727 Ighv10-3A0A075B5T6 119 aa7.04□□□□□ -1.28
Lig3-212ENSMUST00000173727 Gm17577J3QNF7 156 aa7.03□□□□□ -1.28
Lig3-212ENSMUST00000173727 Igkv8-26A0A075B5N5 123 aa7.03□□□□□ -1.28
Lig3-212ENSMUST00000173727 Mrpl52Q9D0Y8 121 aa7.03□□□□□ -1.28
Lig3-212ENSMUST00000173727 CnbpP53996 178 aaKnown RBP7.03□□□□□ -1.28
Lig3-212ENSMUST00000173727 Gm10308Q9CVR5 141 aa7.02□□□□□ -1.29
Lig3-212ENSMUST00000173727 P01819 144 aa7.02□□□□□ -1.29
Lig3-212ENSMUST00000173727 AY074887Q8R5F9 132 aa7.02□□□□□ -1.29
Lig3-212ENSMUST00000173727 Cdk2ap2Q9CPY4 127 aa7.01□□□□□ -1.29
Lig3-212ENSMUST00000173727 Fras1Q80T14 4010 aa7.01□□□□□ -1.29
Lig3-212ENSMUST00000173727 Igkv3-2A0A075B5P0 119 aa7.01□□□□□ -1.29
Lig3-212ENSMUST00000173727 Gm9805F6YK59 57 aa7.01□□□□□ -1.29
Lig3-212ENSMUST00000173727 Sprr1aQ62266 144 aa7.01□□□□□ -1.29
Lig3-212ENSMUST00000173727 Igkv1-88A0A140T8N1 120 aa7□□□□□ -1.29
Lig3-212ENSMUST00000173727 Nupr2Q497P3 102 aa7□□□□□ -1.29
Lig3-212ENSMUST00000173727 PlecQ9QXS1 4691 aaKnown RBP7□□□□□ -1.29
Lig3-212ENSMUST00000173727 Inafm2A0A1L1STD6 152 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Gm11627A6PWP4 55 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Defb40Q70KL2 73 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Defb37Q7TMD2 62 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Igkv1-110A0A0B4J1I0 119 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Vpreb1P13372 142 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Mrpl55Q9CZ83 127 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Ly6g6cQ9Z1Q4 126 aa6.99□□□□□ -1.29
Lig3-212ENSMUST00000173727 Gm9918Q8BUR5 174 aa6.98□□□□□ -1.29
Lig3-212ENSMUST00000173727 A830005F24RikQ8BRT5 167 aa6.97□□□□□ -1.29
Lig3-212ENSMUST00000173727 Rbm3O89086 153 aaKnown RBP6.97□□□□□ -1.29
Lig3-212ENSMUST00000173727 Msrb1Q9JLC3 116 aa6.96□□□□□ -1.29
Lig3-212ENSMUST00000173727 H2al1aQ5M8Q2 105 aa6.96□□□□□ -1.3
Lig3-212ENSMUST00000173727 BC048502Q80Y74 154 aa6.96□□□□□ -1.3
Lig3-212ENSMUST00000173727 9530003J23RikQ8BM26 151 aa6.96□□□□□ -1.3
Lig3-212ENSMUST00000173727 Gm10837Q3UTT8 145 aa6.95□□□□□ -1.3
Lig3-212ENSMUST00000173727 Pou2af1Q64693 256 aa6.95□□□□□ -1.3
Lig3-212ENSMUST00000173727 Pet100P0DJE0 76 aa6.95□□□□□ -1.3
Lig3-212ENSMUST00000173727 Wfdc6bF6ULY1 148 aa6.94□□□□□ -1.3
Lig3-212ENSMUST00000173727 Ighv10-1A0A0B4J1J6 119 aa6.94□□□□□ -1.3
Lig3-212ENSMUST00000173727 TgO08710 2766 aa6.94□□□□□ -1.3
Lig3-212ENSMUST00000173727 Igkv1-122A0A140T8M9 119 aa6.93□□□□□ -1.3
Lig3-212ENSMUST00000173727 Sfta2E9PXB6 77 aa6.93□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 308.9 ms