RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Coa5Q99M07 74 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 BC067074F6RXI4 2391 aa5.1□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Igkv1-88A0A140T8N1 120 aa5.09□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm17577J3QNF7 156 aa5.09□□□□□ -1.6
Bdnf-204ENSMUST00000111044 4933415A04RikQ9D443 101 aa5.09□□□□□ -1.6
Bdnf-204ENSMUST00000111044 OtogO55225 2910 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Ccl21aP84444 133 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Ccl21bP86792 133 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Ccl21cP86793 133 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gpha2Q925Q5 128 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Tep1P97499 2629 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm10770F7D043 238 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Phxr4P15974 95 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 A730071L15RikQ8C4X0 137 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Myo9aQ8C170 2542 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Elof1P60003 83 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 PrcdQ00LT2 53 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Psors1c2Q80ZC9 134 aa5.08□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Celsr2Q9R0M0 2920 aa5.07□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm16181B0V2H2 73 aa5.07□□□□□ -1.6
Bdnf-204ENSMUST00000111044 A330070K13RikQ8CA53 115 aa5.07□□□□□ -1.6
Bdnf-204ENSMUST00000111044 C2cd3Q52KB6 2323 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm11565A2A4M7 156 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 A0A286YCP9 139 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm12353A2AGJ4 60 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm10160F6Y577 67 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Pla2g1bQ9Z0Y2 146 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 LrbaQ9ESE1 2856 aa5.06□□□□□ -1.6
Bdnf-204ENSMUST00000111044 SptssbQ925E8 76 aa5.05□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Igkv3-1A0A075B5P1 119 aa5.05□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Defb37Q7TMD2 62 aa5.05□□□□□ -1.6
Bdnf-204ENSMUST00000111044 TrrapQ80YV3 2565 aaKnown RBP5.05□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Krtap28-13A0A087WQP5 138 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm8439G3UWA7 96 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Cox7b2Q9D2H1 82 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Hivep2Q3UHF7 2430 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 A030003K21RikA0A1Y7VIM3 128 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Gm6217A0A1Y7VJK9 128 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 B9d2Q3UK10 175 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 AY074887Q8R5F9 132 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Nf1Q04690 2841 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Igkv3-2A0A075B5P0 119 aa5.04□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Igkv8-19A0A0G2JFN8 121 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Rnase1P00683 149 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 C130032M10RikQ8C888 123 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Mrpl34Q99N91 92 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Igkv4-92A0A0B4J1I2 117 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 1700042G07RikB1AUF7 90 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 A0A286YE49 62 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 MtorQ9JLN9 2549 aa5.03□□□□□ -1.6
Bdnf-204ENSMUST00000111044 Cox6a2P43023 97 aa5.02□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm17509Q9CZ61 145 aa5.02□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Chd9Q8BYH8 2885 aa5.02□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Ly6c2P0CW03 131 aa5.02□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Cep192E9Q4Y4 2514 aaKnown RBP5.02□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Ndufb1P0DN34 57 aa5.01□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Defb40Q70KL2 73 aa5.01□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm17521F6QAC8 156 aa5.01□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Mapk1ip1lQ8BH93 242 aa5.01□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Lypd5Q9D7Z7 256 aa5.01□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Camk2n2Q78WH7 79 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Chd6A3KFM7 2711 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm26620Q9CY65 116 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 1700074P13RikQ9D9G7 251 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Igkv3-4A0A140T8Q4 119 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm9767G3X930 207 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Srsf12Q8C8K3 266 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 FlnaQ8BTM8 2647 aaKnown RBP5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Ankrd17Q99NH0 2603 aaKnown RBP5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 LystP97412 3788 aa5□□□□□ -1.61
Bdnf-204ENSMUST00000111044 A0A286YCN5 57 aa4.99□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Leap2Q91V13 76 aa4.99□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Defb2P82020 71 aa4.99□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Vpreb3D3Z6J4 130 aa4.99□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm7276Q3TYW4 209 aa4.98□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Cmc4Q61908 68 aa4.98□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Unc79Q0KK59 2596 aa4.98□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Myo18bE9PV66 2605 aa4.98□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm44790A0A0N4SV91 103 aa4.97□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Igkv3-3A0A140T8Q0 119 aa4.97□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Epg5Q80TA9 2572 aa4.97□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Igfn1Q3KNY0 2849 aa4.97□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Zfp462B1AWL2 2495 aaKnown RBP4.96□□□□□ -1.61
Bdnf-204ENSMUST00000111044 Gm10837Q3UTT8 145 aa4.96□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Gm20604F8WIA3 75 aa4.96□□□□□ -1.62
Bdnf-204ENSMUST00000111044 U90926O08546 118 aa4.96□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Usp9yF8VPU6 2556 aa4.95□□□□□ -1.62
Bdnf-204ENSMUST00000111044 FlnbQ80X90 2602 aaKnown RBP4.94□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Brwd1Q921C3 2304 aa4.94□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Pdzd2E9Q1M1 2796 aa4.94□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Gm3646F6S692 53 aa4.94□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Mast4Q811L6 2618 aa4.94□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Krtap11-1E9Q2E9 183 aa4.93□□□□□ -1.62
Bdnf-204ENSMUST00000111044 A730009L09RikA0A1B0GS82 72 aa4.93□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Fam104aA2A6P4 185 aa4.93□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Gm21886J3QJU9 214 aa4.92□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Tenm3Q9WTS6 2715 aa4.92□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Setd2E9Q5F9 2537 aa4.92□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Phf5aP83870 110 aaKnown RBP4.92□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Smim29Q8R043 75 aa4.92□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms