RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Snhg11Q4G0K9 87 aa7.1□□□□□ -1.27
Scn8a-201ENSMUST00000082209 1700018G05RikA0A1B0GSI2 66 aa7.1□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Gm10770F7D043 238 aa7.1□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Gm17689B3GLJ4 109 aa7.09□□□□□ -1.27
Scn8a-201ENSMUST00000082209 AI854703Q8BIN3 203 aa7.09□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Gm20661K7N787 53 aa7.09□□□□□ -1.27
Scn8a-201ENSMUST00000082209 Map1aQ9QYR6 2776 aa7.08□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Defb50Q6TU36 73 aa7.08□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Gm10300Q8C8P7 189 aa7.08□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Prrc2cQ3TLH4 2846 aaKnown RBP7.08□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Gm44790A0A0N4SV91 103 aa7.08□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Chd8Q09XV5 2582 aaKnown RBP7.07□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Ep400Q8CHI8 3072 aaKnown RBP7.07□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Gm10999F6Q4M4 69 aa7.07□□□□□ -1.28
Scn8a-201ENSMUST00000082209 A930002H24RikQ8C8Y3 163 aa7.07□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Defb39Q70KL3 74 aa7.06□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Phxr4P15974 95 aa7.06□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Krtap24-1G3X9A2 248 aa7.05□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Coa5Q99M07 74 aa7.05□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Nbeal1E9PYP2 2688 aa7.05□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Sprr4Q8CGN8 76 aa7.05□□□□□ -1.28
Scn8a-201ENSMUST00000082209 7530416G11RikJ3QJX6 159 aa7.04□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Q8BGJ3 129 aa7.04□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Gm10642Q3TWM1 71 aa7.04□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Gm20538F6Z9R1 75 aa7.04□□□□□ -1.28
Scn8a-201ENSMUST00000082209 Abca12E9Q876 2595 aa7.01□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Defb37Q7TMD2 62 aa7.01□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Gm11213A0A1B0GR83 88 aa7.01□□□□□ -1.29
Scn8a-201ENSMUST00000082209 AY074887Q8R5F9 132 aa7.01□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Mp68P56379 58 aa7.01□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Tnrc18Q80WC3 2878 aa6.99□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Prr13Q9CQJ5 137 aa6.99□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Q8BT88 171 aa6.98□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Phf5aP83870 110 aaKnown RBP6.98□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Usp9yF8VPU6 2556 aa6.97□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Myo18bE9PV66 2605 aa6.97□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Gm9195A0A140LHT4 2805 aa6.97□□□□□ -1.29
Scn8a-201ENSMUST00000082209 Gpr15lA0A0B4J1N3 78 aa6.95□□□□□ -1.3
Scn8a-201ENSMUST00000082209 Gm11565A2A4M7 156 aa6.92□□□□□ -1.3
Scn8a-201ENSMUST00000082209 AplnQ9R0R4 77 aa6.91□□□□□ -1.3
Scn8a-201ENSMUST00000082209 CnbpP53996 178 aaKnown RBP6.91□□□□□ -1.3
Scn8a-201ENSMUST00000082209 PcntP48725 2898 aa6.91□□□□□ -1.3
Scn8a-201ENSMUST00000082209 1810062G17RikG3X8Y2 129 aa6.9□□□□□ -1.3
Scn8a-201ENSMUST00000082209 Bahcc1Q3UHR0 2643 aa6.9□□□□□ -1.3
Scn8a-201ENSMUST00000082209 Zfp292Q9Z2U2 2698 aa6.9□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Usp24B1AY13 2617 aaKnown RBP6.89□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Unc79Q0KK59 2596 aa6.88□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Spaca4Q80ZQ0 127 aa6.88□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Gcn1E9PVA8 2671 aaKnown RBP6.87□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Lypd5Q9D7Z7 256 aa6.87□□□□□ -1.31
Scn8a-201ENSMUST00000082209 FlnaQ8BTM8 2647 aaKnown RBP6.87□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Krtap11-1E9Q2E9 183 aa6.87□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Zcchc13Q9D548 170 aa6.87□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Fam168bQ80XQ8 194 aa6.86□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Cypt15B1AXS0 87 aa6.86□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Fam104aA2A6P4 185 aa6.85□□□□□ -1.31
Scn8a-201ENSMUST00000082209 Prune2Q52KR3 3084 aa6.84□□□□□ -1.31
Scn8a-201ENSMUST00000082209 RetnlbQ99P86 105 aa6.83□□□□□ -1.32
Scn8a-201ENSMUST00000082209 Gm3285A0A1W2P7U0 201 aa6.83□□□□□ -1.32
Scn8a-201ENSMUST00000082209 Gm26620Q9CY65 116 aa6.83□□□□□ -1.32
Scn8a-201ENSMUST00000082209 Lama3Q61789 3330 aa6.82□□□□□ -1.32
Scn8a-201ENSMUST00000082209 Eif4ebp3Q80VV3 101 aa6.81□□□□□ -1.32
Scn8a-201ENSMUST00000082209 C530025M09RikF6RGA8 229 aa6.8□□□□□ -1.32
Scn8a-201ENSMUST00000082209 Ankrd11E9Q4F7 2643 aa6.8□□□□□ -1.32
Scn8a-201ENSMUST00000082209 CriptO70333 101 aa6.78□□□□□ -1.32
Scn8a-201ENSMUST00000082209 FasnP19096 2504 aaKnown RBP6.78□□□□□ -1.32
Scn8a-201ENSMUST00000082209 Usp34Q6ZQ93 3582 aa6.77□□□□□ -1.33
Scn8a-201ENSMUST00000082209 OxtP35454 125 aa6.75□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Defb1P56386 69 aa6.75□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Gm5617Q91VN2 117 aa6.75□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Gm21798J3QNU5 87 aa6.75□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Cypt14J3QPF7 87 aa6.74□□□□□ -1.33
Scn8a-201ENSMUST00000082209 A330070K13RikQ8CA53 115 aa6.74□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Defb9Q8R2I6 67 aa6.73□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Gm10065F6TJM2 114 aa6.73□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Chtf8P0CG14 533 aa6.73□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Rnase13Q5GAM7 153 aa6.73□□□□□ -1.33
Scn8a-201ENSMUST00000082209 Lama2Q60675 3118 aaKnown RBP6.73□□□□□ -1.33
Scn8a-201ENSMUST00000082209 2310034C09RikQ9D746 214 aa6.7□□□□□ -1.34
Scn8a-201ENSMUST00000082209 Gm9955Q8CEJ8 102 aa6.69□□□□□ -1.34
Scn8a-201ENSMUST00000082209 Chd7A2AJK6 2986 aaKnown RBP6.68□□□□□ -1.34
Scn8a-201ENSMUST00000082209 CicQ924A2 2510 aa6.68□□□□□ -1.34
Scn8a-201ENSMUST00000082209 Nsd1O88491 2588 aaKnown RBP6.66□□□□□ -1.34
Scn8a-201ENSMUST00000082209 Ranbp2Q9ERU9 3053 aaKnown RBP6.66□□□□□ -1.34
Scn8a-201ENSMUST00000082209 HrnrQ8VHD8 2496 aa6.65□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Gm9821Q8K076 103 aa6.64□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Phxr5P08399 672 aa6.64□□□□□ -1.35
Scn8a-201ENSMUST00000082209 TrioQ0KL02 3102 aa6.64□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Cdh23Q99PF4 3354 aa6.63□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Plac8Q9JI48 112 aa6.63□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Mki67E9PVX6 3177 aaKnown RBP6.63□□□□□ -1.35
Scn8a-201ENSMUST00000082209 NbdyA0A0N4SUI7 68 aa6.62□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Fn1P11276 2477 aaKnown RBP6.62□□□□□ -1.35
Scn8a-201ENSMUST00000082209 NipblQ6KCD5 2798 aaKnown RBP6.61□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Odf3bQ5M8M2 238 aa6.61□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Dmxl1Q6PNC0 3013 aa6.59□□□□□ -1.35
Scn8a-201ENSMUST00000082209 Rev3lQ61493 3122 aa6.59□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Akap13E9Q394 2776 aa6.58□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Chd6A3KFM7 2711 aa6.58□□□□□ -1.36
Scn8a-201ENSMUST00000082209 AtrQ9JKK8 2635 aa6.57□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 85.2 ms