RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ccl21bP86792 133 aa11.85□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Ccl21cP86793 133 aa11.85□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Cd164Q9R0L9 197 aa11.85□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Ufsp1Q9CZP0 217 aa11.84□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 A0A286YCN5 57 aa11.84□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 BC048502Q80Y74 154 aa11.84□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Brwd1Q921C3 2304 aa11.84□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Gm17577J3QNF7 156 aa11.83□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Sprr2jO70561 109 aa11.83□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Spint4Q9D263 159 aa11.83□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Pdzd2E9Q1M1 2796 aa11.82□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Klk9Q32M27 251 aa11.82□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 A930002H24RikQ8C8Y3 163 aa11.82□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Gm17509Q9CZ61 145 aa11.82□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Gm5617Q91VN2 117 aa11.82□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Sfta2E9PXB6 77 aa11.81□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Igkv3-2A0A075B5P0 119 aa11.81□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Dad1P61804 113 aa11.81□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Cd99Q8VCN6 175 aa11.8□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Igkv4-92A0A0B4J1I2 117 aa11.8□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Igkv1-122A0A140T8M9 119 aa11.79□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Cdk2ap2Q9CPY4 127 aa11.79□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Cdc42se1Q8BHL7 80 aa11.78□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 NipblQ6KCD5 2798 aaKnown RBP11.77□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Igkv3-1A0A075B5P1 119 aa11.77□□□□□ -0.52
Sqstm1-201ENSMUST00000015981 Muc2Q80Z19 2680 aa11.77□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Coa6Q8BGD8 79 aa11.76□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 BsnO88737 3942 aa11.76□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 6430550D23RikE9Q1X6 194 aa11.76□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Gm28374F6SG70 93 aa11.76□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Cox7b2Q9D2H1 82 aa11.75□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Tep1P97499 2629 aa11.75□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 A730009L09RikA0A1B0GS82 72 aa11.75□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Gm9767G3X930 207 aa11.75□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Setd2E9Q5F9 2537 aa11.75□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Gm10197F6QEY5 67 aa11.74□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Gm7276Q3TYW4 209 aa11.74□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 D730001G18RikA0A087WQU7 115 aa11.73□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 A0A286YE02 88 aa11.72□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 AI606181Q8C7B9 129 aa11.72□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 C130032M10RikQ8C888 123 aa11.72□□□□□ -0.53
Sqstm1-201ENSMUST00000015981 Tenm3Q9WTS6 2715 aa11.71□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Cox6a2P43023 97 aa11.69□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Smim29Q8R043 75 aa11.68□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 FlnaQ8BTM8 2647 aaKnown RBP11.68□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Defb12Q8K4N3 78 aa11.68□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 MtorQ9JLN9 2549 aa11.67□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Camk2n2Q78WH7 79 aa11.67□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Hivep3A2A884 2348 aa11.67□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Igkv3-10A0A0G2JGN0 119 aa11.66□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Trav14-1A0A0G2JF94 121 aa11.66□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Gm16181B0V2H2 73 aa11.66□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Mrpl34Q99N91 92 aa11.66□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Ighv8-13A0A075B5Y0 101 aa11.65□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Cmc4Q61908 68 aa11.65□□□□□ -0.54
Sqstm1-201ENSMUST00000015981 Igkv8-19A0A0G2JFN8 121 aa11.64□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Hspg2Q05793 3707 aaKnown RBP11.63□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Col7a1Q63870 2944 aa11.62□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Sprr4Q8CGN8 76 aa11.62□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Coa5Q99M07 74 aa11.61□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Usp9yF8VPU6 2556 aa11.61□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 CrygfQ9CXV3 174 aa11.6□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Gm44790A0A0N4SV91 103 aa11.59□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Sec61gP60060 68 aa11.59□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Defb40Q70KL2 73 aa11.59□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Krtap24-1G3X9A2 248 aa11.59□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Snhg11Q4G0K9 87 aa11.59□□□□□ -0.55
Sqstm1-201ENSMUST00000015981 Igkv3-4A0A140T8Q4 119 aa11.58□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 Ank2Q8C8R3 3898 aa11.57□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 Zfp462B1AWL2 2495 aaKnown RBP11.56□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 Atox1O08997 68 aaKnown RBP11.55□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 Sox16Q62247 57 aa11.53□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 PscaP57096 123 aa11.53□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 Gm37013Q8K491 104 aa11.53□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 4933415A04RikQ9D443 101 aa11.53□□□□□ -0.56
Sqstm1-201ENSMUST00000015981 Epg5Q80TA9 2572 aa11.52□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Reg3bP35230 175 aa11.52□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Defb2P82020 71 aa11.51□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Mast4Q811L6 2618 aa11.51□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Gm17521F6QAC8 156 aa11.51□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Unc79Q0KK59 2596 aa11.49□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 TrrapQ80YV3 2565 aaKnown RBP11.49□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Dmac1Q9CQ00 111 aa11.49□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Vpreb3D3Z6J4 130 aa11.47□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 Tex15F8VPN2 2785 aa11.46□□□□□ -0.57
Sqstm1-201ENSMUST00000015981 P84750 121 aa11.46□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 Gm12353A2AGJ4 60 aa11.45□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 Gm21886J3QJU9 214 aa11.42□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 Phxr4P15974 95 aa11.41□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 1700018G05RikA0A1B0GSI2 66 aa11.41□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 A0A286YE49 62 aa11.41□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 Fam168bQ80XQ8 194 aa11.4□□□□□ -0.58
Sqstm1-201ENSMUST00000015981 ApcQ61315 2845 aa11.39□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Phxr5P08399 672 aa11.38□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 1700074P13RikQ9D9G7 251 aa11.38□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Reg3aO09037 175 aa11.37□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Gm3250E9Q1M3 230 aa11.36□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Wfdc6bF6ULY1 148 aa11.35□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Ube2bP63147 152 aa11.35□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Gm11627A6PWP4 55 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 87.8 ms