RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Trav13-2A0A075B649 110 aa18.8■□□□□ 0.6
Ldb1-208ENSMUST00000185355 5730596B20RikQ8BQ08 205 aa18.8■□□□□ 0.6
Ldb1-208ENSMUST00000185355 Gm5142Q8C5X9 133 aa18.8■□□□□ 0.6
Ldb1-208ENSMUST00000185355 Znf414Q9DCK4 299 aa18.8■□□□□ 0.6
Ldb1-208ENSMUST00000185355 P01819 144 aa18.79■□□□□ 0.6
Ldb1-208ENSMUST00000185355 Trav3-4A0A075B654 114 aa18.78■□□□□ 0.6
Ldb1-208ENSMUST00000185355 E130208F15RikQ3UPV3 143 aa18.78■□□□□ 0.6
Ldb1-208ENSMUST00000185355 Gm7138L7N2C3 230 aa18.77■□□□□ 0.6
Ldb1-208ENSMUST00000185355 Gm3238W4VSP7 230 aa18.77■□□□□ 0.6
Ldb1-208ENSMUST00000185355 Anapc13Q8R034 74 aa18.77■□□□□ 0.59
Ldb1-208ENSMUST00000185355 MifP34884 115 aaKnown RBP18.76■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Cox7bP56393 80 aa18.76■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Igkv8-16A0A0G2JDG9 121 aa18.75■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Trav13n-2A0A0G2JF93 110 aa18.74■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Gm10518F6UQQ9 182 aa18.74■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Gm10845Q3UNY9 185 aa18.72■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Kmt2aP55200 3966 aa18.72■□□□□ 0.59
Ldb1-208ENSMUST00000185355 Fn1P11276 2477 aaKnown RBP18.7■□□□□ 0.58
Ldb1-208ENSMUST00000185355 6430550D23RikE9Q1X6 194 aa18.7■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Xcl1P47993 114 aa18.7■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Reg3bP35230 175 aa18.69■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Gm16181B0V2H2 73 aa18.69■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Reg3dQ9QUS9 175 aa18.69■□□□□ 0.58
Ldb1-208ENSMUST00000185355 CnbpP53996 178 aaKnown RBP18.67■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Wfdc17Q5SSJ1 76 aa18.67■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Gm17509Q9CZ61 145 aa18.67■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Wfdc12Q9JHY3 85 aa18.67■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Stab1Q8R4Y4 2571 aa18.66■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Ighv13-2A0A0A6YWN3 119 aa18.66■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Trav14d-3-dv8A0A075B619 120 aa18.65■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Rpl39lQ9CQD0 51 aa18.65■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Atp5eP56382 52 aa18.65■□□□□ 0.58
Ldb1-208ENSMUST00000185355 AplnQ9R0R4 77 aa18.65■□□□□ 0.58
Ldb1-208ENSMUST00000185355 Cox7b2Q9D2H1 82 aa18.64■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Ube2d4D3YUH6 135 aa18.63■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Igkv4-92A0A0B4J1I2 117 aa18.62■□□□□ 0.57
Ldb1-208ENSMUST00000185355 9430015G10RikA2ASP7 199 aa18.62■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Gm36176A0A1W2P8D5 158 aa18.61■□□□□ 0.57
Ldb1-208ENSMUST00000185355 1810062G17RikG3X8Y2 129 aa18.61■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Gm5617Q91VN2 117 aa18.59■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Hivep1Q03172 2688 aa18.59■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Gm10251J3QPM5 127 aa18.58■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Hbb-b2P02089 147 aa18.58■□□□□ 0.57
Ldb1-208ENSMUST00000185355 MrapQ9D159 127 aa18.58■□□□□ 0.57
Ldb1-208ENSMUST00000185355 Srrm2Q8BTI8 2703 aaKnown RBP18.57■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Gm9805F6YK59 57 aa18.56■□□□□ 0.56
Ldb1-208ENSMUST00000185355 AY074887Q8R5F9 132 aa18.56■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Nsd1O88491 2588 aaKnown RBP18.56■□□□□ 0.56
Ldb1-208ENSMUST00000185355 ApcQ61315 2845 aa18.56■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Mrpl52Q9D0Y8 121 aa18.55■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Ifitm6A0A1B0GS75 124 aa18.54■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Klk12B2RVZ0 247 aa18.54■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Rpl18aP62717 176 aaKnown RBP18.54■□□□□ 0.56
Ldb1-208ENSMUST00000185355 A730009L09RikA0A1B0GS82 72 aa18.53■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Ufsp1Q9CZP0 217 aa18.53■□□□□ 0.56
Ldb1-208ENSMUST00000185355 Ighv10-1A0A0B4J1J6 119 aa18.51■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Dnah3Q8BW94 4083 aa18.51■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Gm10770F7D043 238 aa18.5■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Spata3Q9D9T6 193 aa18.5■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Gm7102J3QQ10 178 aa18.48■□□□□ 0.55
Ldb1-208ENSMUST00000185355 PtprqP0C5E4 2300 aa18.47■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Defa2P28309 93 aa18.47■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Sprr4Q8CGN8 76 aa18.47■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Camk2n2Q78WH7 79 aa18.46■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Defb10Q8R2I8 73 aa18.46■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Trav14-1A0A0G2JF94 121 aa18.46■□□□□ 0.55
Ldb1-208ENSMUST00000185355 Gm10320E9PW43 113 aa18.45■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Defa20Q45VN2 95 aa18.45■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Igkv2-109A0A075B5K6 120 aa18.43■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Igkv4-58A0A0G2JGI6 119 aa18.42■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Ighv10-3A0A075B5T6 119 aa18.42■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Gm17577J3QNF7 156 aa18.42■□□□□ 0.54
Ldb1-208ENSMUST00000185355 A0A286YCN5 57 aa18.41■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Sslp1Q3UN54 99 aa18.4■□□□□ 0.54
Ldb1-208ENSMUST00000185355 Gm7137J3QMW1 236 aa18.38■□□□□ 0.53
Ldb1-208ENSMUST00000185355 BC048502Q80Y74 154 aa18.38■□□□□ 0.53
Ldb1-208ENSMUST00000185355 Cdk2ap2Q9CPY4 127 aa18.38■□□□□ 0.53
Ldb1-208ENSMUST00000185355 2310034G01RikA0A286YDL3 209 aa18.36■□□□□ 0.53
Ldb1-208ENSMUST00000185355 Q9DAA7 145 aa18.35■□□□□ 0.53
Ldb1-208ENSMUST00000185355 Igkv8-26A0A075B5N5 123 aa18.35■□□□□ 0.53
Ldb1-208ENSMUST00000185355 4930519P11RikQ9CUJ8 166 aa18.34■□□□□ 0.53
Ldb1-208ENSMUST00000185355 E130218I03RikA0A0U1RNU5 63 aa18.33■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Igkv1-88A0A140T8N1 120 aa18.33■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Gm16485Q8C4B7 115 aa18.33■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Notch1Q01705 2531 aa18.32■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Msrb1Q9JLC3 116 aa18.32■□□□□ 0.52
Ldb1-208ENSMUST00000185355 BB014433Q8C5R5 389 aa18.31■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Elof1P60003 83 aa18.29■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Pcp4P63054 62 aa18.29■□□□□ 0.52
Ldb1-208ENSMUST00000185355 Inafm2A0A1L1STD6 152 aa18.26■□□□□ 0.51
Ldb1-208ENSMUST00000185355 AW011738F6S7Q2 159 aa18.26■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Ntn5Q3UQ22 452 aa18.26■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Igkv8-27A0A0G2JF28 120 aa18.26■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Igkv8-30A0A140T8M3 121 aa18.26■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Dnah6E9Q0B6 4144 aa18.25■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Cd164Q9R0L9 197 aa18.24■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Ormdl1Q921I0 153 aa18.23■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Prr13Q9CQJ5 137 aa18.23■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Lamtor3O88653 124 aa18.22■□□□□ 0.51
Ldb1-208ENSMUST00000185355 Gm7276Q3TYW4 209 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 264.5 ms