RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 A930002H24RikQ8C8Y3 163 aa5.29□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Ighv2-9A0A075B5Q5 116 aa5.29□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Igkv8-18A0A0B4J1J3 123 aa5.29□□□□□ -1.56
Bdnf-209ENSMUST00000111050 2010109I03RikQ9CQ11 111 aa5.29□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Cd164Q9R0L9 197 aa5.29□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Nav3Q80TN7 2359 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Gm7257D3YX25 99 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Prh1P05142 261 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 NrgnP60761 78 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 OtoglF7A4A7 2325 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Abca2P41234 2434 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Cox7a1P56392 80 aa5.28□□□□□ -1.56
Bdnf-209ENSMUST00000111050 Ighv10-1A0A0B4J1J6 119 aa5.27□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Sfta2E9PXB6 77 aa5.27□□□□□ -1.57
Bdnf-209ENSMUST00000111050 C2cd3Q52KB6 2323 aa5.27□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm9195A0A140LHT4 2805 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Igkv8-16A0A0G2JDG9 121 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Ccdc179J3QM76 67 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Q99M08 65 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Reg3dQ9QUS9 175 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Hivep3A2A884 2348 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Igkv4-61A0A0G2JH00 117 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm5617Q91VN2 117 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 MobpQ9D2P8 170 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm10197F6QEY5 67 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 C530025M09RikF6RGA8 229 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Ttc28Q80XJ3 2450 aa5.26□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Ep300B2RWS6 2412 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Notch2O35516 2470 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Q8BT88 171 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Nop10Q9CQS2 64 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Pde6gP09174 87 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Defb26Q30KN7 186 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Cdk2ap2Q9CPY4 127 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 CrygfQ9CXV3 174 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Ighv2-5A0A0A6YY69 116 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm3285A0A1W2P7U0 201 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm11011D3Z3L9 86 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Spink4O35679 86 aa5.25□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm10772F7AIG4 85 aa5.24□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Igkv4-54A0A0G2JES9 117 aa5.24□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Wfdc12Q9JHY3 85 aa5.24□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Igkv3-10A0A0G2JGN0 119 aa5.24□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Igkv4-72A0A0B4J1I4 117 aa5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 A0A286YE02 88 aa5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 9530003J23RikQ8BM26 151 aa5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Cep192E9Q4Y4 2514 aaKnown RBP5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Prr15lQ8JZM2 100 aa5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 A730071L15RikQ8C4X0 137 aa5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm10518F6UQQ9 182 aa5.23□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Igkv8-24A0A140T8P5 121 aa5.22□□□□□ -1.57
Bdnf-209ENSMUST00000111050 Gm9805F6YK59 57 aa5.22□□□□□ -1.57
Bdnf-209ENSMUST00000111050 6430550D23RikE9Q1X6 194 aa5.22□□□□□ -1.57
Bdnf-209ENSMUST00000111050 AI606181Q8C7B9 129 aa5.22□□□□□ -1.57
Bdnf-209ENSMUST00000111050 PrlhG3UWC3 86 aa5.21□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Klk9Q32M27 251 aa5.21□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Igkv8-34A0A0G2JDU0 121 aa5.21□□□□□ -1.58
Bdnf-209ENSMUST00000111050 PspnO70300 156 aa5.21□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Cdc42se1Q8BHL7 80 aa5.21□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Celsr2Q9R0M0 2920 aa5.21□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gm37988J3QM41 62 aa5.2□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Atox1O08997 68 aaKnown RBP5.2□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Msrb1Q9JLC3 116 aa5.2□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Defb37Q7TMD2 62 aa5.2□□□□□ -1.58
Bdnf-209ENSMUST00000111050 A330070K13RikQ8CA53 115 aa5.19□□□□□ -1.58
Bdnf-209ENSMUST00000111050 AcacbE9Q4Z2 2448 aa5.19□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Lelp1Q9DAE3 120 aa5.19□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Usp9xP70398 2559 aaKnown RBP5.19□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Ighv2-2A0A075B5P8 116 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Igkv8-28A0A0G2JE47 121 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 P01821 116 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Tcl1b3P56842 122 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 BC048502Q80Y74 154 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Igkv1-122A0A140T8M9 119 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gm7075D3Z497 112 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Zfyve26Q5DU37 2529 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Chd6A3KFM7 2711 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Lrrk2Q5S006 2527 aa5.18□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Trav9n-4A0A075B631 113 aa5.17□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gm3443F7CCV5 94 aa5.17□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Defb42Q8BVB5 75 aa5.17□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Coa6Q8BGD8 79 aa5.17□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Cox7bP56393 80 aa5.16□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gm9767G3X930 207 aa5.16□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Defb33Q30KN3 62 aa5.16□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Csmd2V9GX34 3611 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Krtap28-13A0A087WQP5 138 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gm20604F8WIA3 75 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gpha2Q925Q5 128 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 4933415A04RikQ9D443 101 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 BC067074F6RXI4 2391 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Gm10770F7D043 238 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 Sptbn4E9PX29 2561 aa5.15□□□□□ -1.58
Bdnf-209ENSMUST00000111050 SptssbQ925E8 76 aa5.15□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Myo9aQ8C170 2542 aa5.15□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Lypd5Q9D7Z7 256 aa5.14□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Ankrd17Q99NH0 2603 aaKnown RBP5.14□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Chd8Q09XV5 2582 aaKnown RBP5.14□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Igkv3-2A0A075B5P0 119 aa5.14□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Fam104aA2A6P4 185 aa5.14□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 106.4 ms