RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm9903Q8C9Y8 129 aa8.59□□□□□ -1.03
Rnf4-201ENSMUST00000030992 EnhoQ8K1D8 76 aa8.59□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Phxr5P08399 672 aa8.59□□□□□ -1.03
Rnf4-201ENSMUST00000030992 CnbpP53996 178 aaKnown RBP8.59□□□□□ -1.03
Rnf4-201ENSMUST00000030992 4930556J24RikQ9D4U7 146 aa8.59□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Trav13-2A0A075B649 110 aa8.59□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Xcl1P47993 114 aa8.59□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Dnal4Q9DCM4 105 aa8.59□□□□□ -1.04
Rnf4-201ENSMUST00000030992 MifP34884 115 aaKnown RBP8.58□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Prr13Q9CQJ5 137 aa8.58□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Dnah3Q8BW94 4083 aa8.57□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Cox7bP56393 80 aa8.56□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Ifitm6A0A1B0GS75 124 aa8.56□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Snhg11Q4G0K9 87 aa8.56□□□□□ -1.04
Rnf4-201ENSMUST00000030992 E130114P18RikF6S0S7 154 aa8.55□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Rpl39lQ9CQD0 51 aa8.55□□□□□ -1.04
Rnf4-201ENSMUST00000030992 PolqQ8CGS6 2544 aa8.54□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Igkv8-24A0A140T8P5 121 aa8.54□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Gm10518F6UQQ9 182 aa8.54□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Igkv3-1A0A075B5P1 119 aa8.53□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Wfdc12Q9JHY3 85 aa8.53□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Gm10320E9PW43 113 aa8.53□□□□□ -1.04
Rnf4-201ENSMUST00000030992 E130208F15RikQ3UPV3 143 aa8.53□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Igkv8-16A0A0G2JDG9 121 aa8.52□□□□□ -1.04
Rnf4-201ENSMUST00000030992 4930519P11RikQ9CUJ8 166 aa8.52□□□□□ -1.04
Rnf4-201ENSMUST00000030992 Gm7138L7N2C3 230 aa8.51□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Gm3238W4VSP7 230 aa8.51□□□□□ -1.05
Rnf4-201ENSMUST00000030992 AY074887Q8R5F9 132 aa8.5□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Ube2d4D3YUH6 135 aa8.5□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Gm17509Q9CZ61 145 aa8.5□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Reg3dQ9QUS9 175 aa8.5□□□□□ -1.05
Rnf4-201ENSMUST00000030992 AtrQ9JKK8 2635 aa8.5□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Igkv8-34A0A0G2JDU0 121 aa8.49□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Gm10770F7D043 238 aa8.49□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Klk12B2RVZ0 247 aa8.49□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Igkv4-92A0A0B4J1I2 117 aa8.48□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Notch2O35516 2470 aa8.48□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Gm9805F6YK59 57 aa8.48□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Hbb-b2P02089 147 aa8.47□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Gm5617Q91VN2 117 aa8.47□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Mrpl52Q9D0Y8 121 aa8.47□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Gm7102J3QQ10 178 aa8.47□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Ighv10-3A0A075B5T6 119 aa8.47□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Q9DAA7 145 aa8.47□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Ighv10-1A0A0B4J1J6 119 aa8.46□□□□□ -1.05
Rnf4-201ENSMUST00000030992 BB014433Q8C5R5 389 aa8.46□□□□□ -1.05
Rnf4-201ENSMUST00000030992 Rpl18aP62717 176 aaKnown RBP8.46□□□□□ -1.06
Rnf4-201ENSMUST00000030992 AplnQ9R0R4 77 aa8.46□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Igkv2-109A0A075B5K6 120 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Ighv13-2A0A0A6YWN3 119 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Igkv4-58A0A0G2JGI6 119 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 9430015G10RikA2ASP7 199 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 A730009L09RikA0A1B0GS82 72 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Reg3bP35230 175 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Cox7b2Q9D2H1 82 aa8.45□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Ntn5Q3UQ22 452 aa8.44□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Gm10735Q3US96 136 aa8.44□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Srrm2Q8BTI8 2703 aaKnown RBP8.43□□□□□ -1.06
Rnf4-201ENSMUST00000030992 ApcQ61315 2845 aa8.43□□□□□ -1.06
Rnf4-201ENSMUST00000030992 6430550D23RikE9Q1X6 194 aa8.43□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Hist1h4aP62806 103 aaKnown RBP8.43□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Ufsp1Q9CZP0 217 aa8.43□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Gm16181B0V2H2 73 aa8.42□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Sprr4Q8CGN8 76 aa8.42□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Dnah6E9Q0B6 4144 aa8.42□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Gm36176A0A1W2P8D5 158 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Fn1P11276 2477 aaKnown RBP8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Igkv8-26A0A075B5N5 123 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Igkv8-27A0A0G2JF28 120 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Igkv8-30A0A140T8M3 121 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 2310034G01RikA0A286YDL3 209 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Stab1Q8R4Y4 2571 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Dnah10D3YYQ8 4591 aa8.41□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Igf1P05017 153 aa8.4□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Defa20Q45VN2 95 aa8.4□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Msrb1Q9JLC3 116 aa8.4□□□□□ -1.06
Rnf4-201ENSMUST00000030992 A0A286YCN5 57 aa8.4□□□□□ -1.06
Rnf4-201ENSMUST00000030992 Hivep1Q03172 2688 aa8.4□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Dnah1E9Q8T7 4250 aa8.39□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Gm10308Q9CVR5 141 aa8.39□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Trav14-1A0A0G2JF94 121 aa8.39□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Defa2P28309 93 aa8.39□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Gm28539A0A087WSL9 92 aa8.38□□□□□ -1.07
Rnf4-201ENSMUST00000030992 9530053A07RikE9PVG8 2581 aa8.38□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Dnah17Q69Z23 4481 aa8.38□□□□□ -1.07
Rnf4-201ENSMUST00000030992 SmcpP15265 143 aa8.38□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Apoc4Q61268 124 aa8.38□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Dnah14A0A140LIJ4 4489 aa8.37□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Gm17577J3QNF7 156 aa8.37□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Igkv8-21A0A140T8P7 120 aa8.37□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Wfdc17Q5SSJ1 76 aa8.37□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Camk2n2Q78WH7 79 aa8.37□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Defa1P11477 93 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Elof1P60003 83 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Ormdl1Q921I0 153 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 E130218I03RikA0A0U1RNU5 63 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Inafm2A0A1L1STD6 152 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Tmem254aP0DN89 123 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Tmem254bP0DN90 123 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Tmem254cP0DN91 123 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 80.4 ms