RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Gm10577Q3UDV9 132 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 E130208F15RikQ3UPV3 143 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Pet100P0DJE0 76 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Pfn2Q9JJV2 140 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Pla2g2dQ9WVF6 144 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Gm10322F7D7I4 111 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Fxyd5P97808 178 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Bles03Q8VD62 251 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 MplkipQ9D011 178 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Med13lQ6JPI3 2207 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Tenm4Q3UHK6 2771 aa7.3□□□□□ -1.24
Ctc1-202ENSMUST00000116359 P01753 117 aa7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Prpf8Q99PV0 2335 aaKnown RBP7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Igkv4-62A0A0G2JDW9 117 aa7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Rbm3O89086 153 aaKnown RBP7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Ppp1r32Q148A4 427 aa7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Rpl36aP83882 106 aaKnown RBP7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Pou2af1Q64693 256 aa7.29□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Dmbt1Q60997 2085 aa7.28□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Defa28D3Z1V9 94 aa7.28□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Ighv5-8A0A075B676 92 aa7.27□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Trav13n-2A0A0G2JF93 110 aa7.27□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Ucn2Q99ML8 113 aa7.27□□□□□ -1.24
Ctc1-202ENSMUST00000116359 Ighv1-58A0A075B5W9 117 aa7.27□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Igkv8-21A0A140T8P7 120 aa7.27□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Igfn1Q3KNY0 2849 aa7.27□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Igkv4-69A0A0B4J1I6 116 aa7.27□□□□□ -1.25
Ctc1-202ENSMUST00000116359 FlncQ8VHX6 2726 aaKnown RBP7.27□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Nsun4C4P6S0 806 aaKnown RBP7.27□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Q9DAA7 145 aa7.26□□□□□ -1.25
Ctc1-202ENSMUST00000116359 P01819 144 aa7.26□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Gm10490F6VBM2 120 aa7.26□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Prp2P05143 317 aa7.26□□□□□ -1.25
Ctc1-202ENSMUST00000116359 3110018I06RikQ9CXS0 120 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Fam19a3Q7TPG6 132 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Gm10308Q9CVR5 141 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 LrbaQ9ESE1 2856 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Igkv4-79A0A075B5L8 119 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Ighv1-56A0A0A6YXG2 117 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Gm15557A6PWY0 234 aa7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Sorl1O88307 2215 aaKnown RBP7.25□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Ighv1-63A0A075B5X2 117 aa7.24□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Gm21994F6T2D2 329 aa7.24□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Trbv13-2A0A140T8N6 113 aa7.24□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Ankrd17Q99NH0 2603 aaKnown RBP7.24□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Ubl5Q9EPV8 73 aa7.23□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Nsd1O88491 2588 aaKnown RBP7.23□□□□□ -1.25
Ctc1-202ENSMUST00000116359 FlnaQ8BTM8 2647 aaKnown RBP7.23□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Rnf152Q8BG47 203 aa7.23□□□□□ -1.25
Ctc1-202ENSMUST00000116359 PolqQ8CGS6 2544 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Igkv4-53A0A0G2JFC6 119 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 BlcapP62951 87 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Ormdl1Q921I0 153 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Svep1A2AVA0 3567 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Lamtor3O88653 124 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Igkv2-109A0A075B5K6 120 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Gm10509O88255 85 aa7.22□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Ccdc179J3QM76 67 aa7.21□□□□□ -1.25
Ctc1-202ENSMUST00000116359 P01745 121 aa7.21□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Vpreb2P13373 142 aa7.21□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Rpl39lQ9CQD0 51 aa7.21□□□□□ -1.25
Ctc1-202ENSMUST00000116359 Trav13-4-dv7A0A075B6C2 110 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 B230359F08RikA0A0B4J1K3 109 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Igsf10Q3V1M1 2594 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Igkv1-99F6XWB2 120 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 MsmbO08540 113 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 E130116L18RikQ8BMV6 101 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Pgpep1lQ9CWB5 130 aa7.21□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Usp9yF8VPU6 2556 aa7.2□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Gm10845Q3UNY9 185 aa7.2□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Gm9913Q8BQQ2 135 aa7.2□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Utp20Q5XG71 2788 aaKnown RBP7.2□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Ighv2-9-1A0A075B697 116 aa7.2□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Igkv1-110A0A0B4J1I0 119 aa7.2□□□□□ -1.26
Ctc1-202ENSMUST00000116359 GfyJ3KML8 504 aa7.19□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Spink8Q09TK9 105 aa7.19□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Spink1P09036 80 aa7.19□□□□□ -1.26
Ctc1-202ENSMUST00000116359 P01755 137 aa7.19□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Gm5142Q8C5X9 133 aa7.19□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Erdr1J3QMM0 206 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Fgfbp3Q1HCM0 245 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Wfdc15aQ8BH89 80 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Trav13-1A0A075B644 110 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Cox17P56394 63 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Mrps21P58059 87 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Gm9903Q8C9Y8 129 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 E130114P18RikF6S0S7 154 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Tfpi2O35536 230 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Snrpd3P62320 126 aaKnown RBP7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Spint4Q9D263 159 aa7.18□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Ighv1-49A0A0A6YWX2 117 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Gm10553J3QPF1 123 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Prr9Q8BV84 116 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 A930002H24RikQ8C8Y3 163 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Col7a1Q63870 2944 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Ndufc1Q9CQY9 76 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Gm17689B3GLJ4 109 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Cd164Q9R0L9 197 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Chd9Q8BYH8 2885 aa7.17□□□□□ -1.26
Ctc1-202ENSMUST00000116359 Celsr2Q9R0M0 2920 aa7.16□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms