RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Defa22Q8C1N8 93 aa14.35□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 Triap1Q9D8Z2 76 aa14.35□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 Zfand2aQ9JII7 171 aa14.35□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 Trav11A0A0B4J1J9 114 aa14.34□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 Krtap10-10A0A1W2P7T6 217 aa14.34□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 Wfdc21Q8BTE6 63 aa14.34□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 EnhoQ8K1D8 76 aa14.34□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 2010109I03RikQ9CQ11 111 aa14.34□□□□□ -0.11
Ccdc88a-202ENSMUST00000109477 Trav9n-4A0A075B631 113 aa14.33□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Trav4-3A0A0B4J1K1 110 aa14.33□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Smim13E9Q942 88 aa14.33□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Defa2P28309 93 aa14.33□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Plscr4P58196 326 aa14.33□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Vmn1r197Q8R265 298 aa14.33□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 AponG3X9D6 251 aa14.32□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Gm28051J3QMA2 81 aa14.32□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Rmi2Q3UPE3 149 aa14.32□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Dync2h1Q45VK7 4306 aa14.32□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Tmem238A9JSM3 176 aa14.32□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Iglc1A0A0G2JE99 106 aa14.31□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Krtap11-1E9Q2E9 183 aa14.3□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 S100a8P27005 89 aa14.3□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Bsph2Q0Q236 131 aa14.3□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Isg15Q64339 161 aaKnown RBP14.3□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 Q9DAA3 117 aa14.3□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 4930432M17RikQ3V0W9 174 aa14.28□□□□□ -0.12
Ccdc88a-202ENSMUST00000109477 SpinklQ8CEK3 90 aa14.27□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Tax1bp3Q9DBG9 124 aa14.27□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Gm11213A0A1B0GR83 88 aa14.26□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 G0s2Q61585 103 aa14.26□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Dnah7bL7N1Y0 4068 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Ighv13-2A0A0A6YWN3 119 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 C920008G01RikA0A0B4J1N1 112 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Gm9507D3Z5T3 223 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Defa9P50707 93 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Morn5Q9DAI9 170 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Dnah1E9Q8T7 4250 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Ighv1-61P01749 117 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Prss58Q8BW11 241 aa14.24□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Defb50Q6TU36 73 aa14.23□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Gm9918Q8BUR5 174 aa14.23□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 PlecQ9QXS1 4691 aaKnown RBP14.22□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Insl3O09107 122 aa14.21□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Gemin7Q9CWY4 129 aa14.21□□□□□ -0.13
Ccdc88a-202ENSMUST00000109477 Gm26727M0QWT1 121 aa14.21□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 1700010B08RikQ9DAI7 102 aa14.21□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Timm17bQ9Z0V7 172 aa14.21□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 P01896 185 aa14.2□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Trav4d-3A0A075B625 110 aa14.19□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Gm6812B1AXU1 112 aa14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Tmem86bQ497J1 226 aa14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Rpl24Q8BP67 157 aaKnown RBP14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Fras1Q80T14 4010 aa14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Cks1bP61025 79 aa14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Srsf9Q9D0B0 222 aaKnown RBP14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Q9DAQ5 155 aa14.18□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Trav9d-4A0A0G2JG37 103 aa14.17□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 P01755 137 aa14.16□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 OxtP35454 125 aa14.16□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Defa15P50713 93 aa14.16□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 P01843 105 aa14.15□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Mzt1Q8BUR9 78 aa14.15□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Ighv1-56A0A0A6YXG2 117 aa14.15□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 2310061N02RikQ9D6S9 174 aa14.15□□□□□ -0.14
Ccdc88a-202ENSMUST00000109477 Gm6793B2RXM2 351 aa14.14□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Gm16485Q8C4B7 115 aa14.14□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Gm5617Q91VN2 117 aa14.14□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 4930544G11RikQ9CR99 193 aa14.14□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 BtcQ05928 177 aa14.13□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Smr3aQ61900 147 aa14.12□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Cops9Q3U898 57 aa14.12□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Igkv8-24A0A140T8P5 121 aa14.11□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 1700011M02RikB1AX35 88 aa14.11□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Glrp1E9Q9S8 174 aa14.11□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 B230359F08RikA0A0B4J1K3 109 aa14.1□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Cox7cP17665 63 aa14.1□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Tac4Q99N14 128 aa14.1□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Ly6g6cQ9Z1Q4 126 aa14.09□□□□□ -0.15
Ccdc88a-202ENSMUST00000109477 Gm11020F6ZGD5 61 aa14.08□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Gm10577Q3UDV9 132 aa14.08□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Ndufa12Q7TMF3 145 aaKnown RBP14.07□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Sostdc1Q9CQN4 206 aa14.07□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Gm867A0A1W2P7T4 151 aa14.07□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 4930415O20RikQ8CDT5 131 aa14.06□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Dnah7aE9Q0T8 4024 aa14.06□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Pgpep1Q9ESW8 209 aa14.05□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 TgO08710 2766 aa14.05□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 C530025M09RikF6RGA8 229 aa14.04□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Cox7b2Q9D2H1 82 aa14.04□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 CckP09240 115 aa14.04□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Ighv2-9A0A075B5Q5 116 aa14.03□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Tcl1b5P56845 121 aa14.03□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Dppa2Q9CWH0 301 aa14.03□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 Pfn2Q9JJV2 140 aa14.03□□□□□ -0.16
Ccdc88a-202ENSMUST00000109477 4930556J24RikQ9D4U7 146 aa14.01□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Tspan13Q9D8C2 204 aa14.01□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Slamf6Q9ET39 351 aa14.01□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 2310050C09RikG5E8Z3 280 aa14□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Rab37Q9JKM7 223 aa14□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Cox8cA6H666 72 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 83.3 ms