RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Igkv8-16A0A0G2JDG9 121 aa8.17□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Q99M08 65 aa8.17□□□□□ -1.1
Topbp1-201ENSMUST00000035164 2010109I03RikQ9CQ11 111 aa8.17□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Fxyd5P97808 178 aa8.17□□□□□ -1.1
Topbp1-201ENSMUST00000035164 LrbaQ9ESE1 2856 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Leap2Q91V13 76 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Ucn2Q99ML8 113 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Ighv1-63A0A075B5X2 117 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Tmem86bQ497J1 226 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Lamtor3O88653 124 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 4930564D02RikQ9D4S4 103 aa8.16□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Itpr3P70227 2670 aa8.15□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Fam110dQ80X91 271 aa8.15□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Hectd1Q69ZR2 2618 aaKnown RBP8.15□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Fgfbp3Q1HCM0 245 aa8.15□□□□□ -1.1
Topbp1-201ENSMUST00000035164 4930524J08RikQ9CUJ5 163 aa8.15□□□□□ -1.1
Topbp1-201ENSMUST00000035164 A930009A15RikG3UYI6 118 aa8.15□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Fgf23Q9EPC2 251 aa8.15□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Ubl5Q9EPV8 73 aa8.14□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Gm10322F7D7I4 111 aa8.14□□□□□ -1.11
Topbp1-201ENSMUST00000035164 SbsponQ3UPR9 264 aa8.14□□□□□ -1.11
Topbp1-201ENSMUST00000035164 FshbQ60687 130 aa8.14□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Ighv1-61P01749 117 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 HrnrQ8VHD8 2496 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Samd13D3YUG0 102 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Vmo1Q5SXG7 201 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Rpl39lQ9CQD0 51 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Reg3dQ9QUS9 175 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Ankrd17Q99NH0 2603 aaKnown RBP8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Gm9913Q8BQQ2 135 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Dmbt1Q60997 2085 aa8.13□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Krtap27-1E9PX37 202 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 BikO70337 150 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Cd164l2Q9D6W7 172 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Igkv8-24A0A140T8P5 121 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Gm9925F6T2U3 160 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 4930518I15RikQ3V2W7 57 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Cdc42se2Q8BGH7 84 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Igkv1-117A0A140T8M0 119 aa8.12□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Tmem254aP0DN89 123 aa8.11□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Tmem254bP0DN90 123 aa8.11□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Tmem254cP0DN91 123 aa8.11□□□□□ -1.11
Topbp1-201ENSMUST00000035164 EnhoQ8K1D8 76 aa8.11□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Pla2g2cP48076 150 aa8.11□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Gm10518F6UQQ9 182 aa8.1□□□□□ -1.11
Topbp1-201ENSMUST00000035164 P06329 120 aa8.1□□□□□ -1.11
Topbp1-201ENSMUST00000035164 GhrhP16043 103 aa8.1□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Acyp1P56376 99 aa8.09□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Rpl18aP62717 176 aaKnown RBP8.09□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Wfdc12Q9JHY3 85 aa8.09□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Lelp1Q9DAE3 120 aa8.09□□□□□ -1.11
Topbp1-201ENSMUST00000035164 Igkv4-61A0A0G2JH00 117 aa8.08□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Cmya5Q70KF4 3739 aa8.08□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Spata25Q9DA57 226 aa8.08□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Gm10577Q3UDV9 132 aa8.08□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Pip4p1Q3TWL2 284 aa8.07□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Tfpi2O35536 230 aa8.07□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Plac8l1Q08EJ0 177 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Ppp1r32Q148A4 427 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Q8R092 253 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Akap13E9Q394 2776 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Defa28D3Z1V9 94 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Cox6b1P56391 86 aaKnown RBP8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Serp2Q6TAW2 65 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 GfyJ3KML8 504 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Fam19a1Q7TPG8 133 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 ScxQ64124 207 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Mrpl55Q9CZ83 127 aa8.06□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Fn1P11276 2477 aaKnown RBP8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Gm3443F7CCV5 94 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Tm2d2Q8R0I4 213 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Rnase1P00683 149 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Trbv13-2A0A140T8N6 113 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Rpl28P41105 137 aaKnown RBP8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Ormdl1Q921I0 153 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 AtrQ9JKK8 2635 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Igkv4-58A0A0G2JGI6 119 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 A0A286YCN5 57 aa8.05□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Helz2E9QAM5 2947 aaKnown RBP8.04□□□□□ -1.12
Topbp1-201ENSMUST00000035164 PrcdQ00LT2 53 aa8.04□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Rbm3O89086 153 aaKnown RBP8.04□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Gm5142Q8C5X9 133 aa8.04□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Igkv4-72A0A0B4J1I4 117 aa8.03□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Csdc2Q91YQ3 154 aa8.03□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Dad1P61804 113 aa8.03□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Tmem223Q9CQE2 199 aaKnown RBP8.03□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Igkv1-88A0A140T8N1 120 aa8.03□□□□□ -1.12
Topbp1-201ENSMUST00000035164 Igkv1-122A0A140T8M9 119 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Defb12Q8K4N3 78 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Usp24B1AY13 2617 aaKnown RBP8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Ighv13-2A0A0A6YWN3 119 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 7530416G11RikJ3QJX6 159 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Pla2g1bQ9Z0Y2 146 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 4930546C10RikE9Q4Y3 121 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Gm10549Q3URY4 149 aa8.02□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Tex15F8VPN2 2785 aa8.01□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Defb42Q8BVB5 75 aa8.01□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Igkv4-54A0A0G2JES9 117 aa8.01□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Igkv3-1A0A075B5P1 119 aa8.01□□□□□ -1.13
Topbp1-201ENSMUST00000035164 Pet100P0DJE0 76 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms