RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 P01747 120 aa7.01□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Rpl39lQ9CQD0 51 aa7.01□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Mrpl35Q9CQL6 188 aa7.01□□□□□ -1.29
Scn8a-213ENSMUST00000201549 P01643 108 aa7.01□□□□□ -1.29
Scn8a-213ENSMUST00000201549 PpdpfQ9CR37 115 aa7.01□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Atp5eP56382 52 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Mki67E9PVX6 3177 aaKnown RBP7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Nupr2Q497P3 102 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Pla2g2eQ9QUL3 142 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Q9DAQ5 155 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ep300B2RWS6 2412 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ly6c2P0CW03 131 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ighv1-63A0A075B5X2 117 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Gm10267M0QWD8 85 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 P01748 117 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 P01753 117 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ly6g6cQ9Z1Q4 126 aa7□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Trav4d-3A0A075B625 110 aa6.99□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Gm15557A6PWY0 234 aa6.99□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Rbx1P62878 108 aa6.99□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Tcte2E9PY37 120 aa6.99□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Wfdc17Q5SSJ1 76 aa6.99□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Tfpi2O35536 230 aa6.99□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ifitm1Q9D103 106 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Nsun4C4P6S0 806 aaKnown RBP6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 1500011B03RikQ3TTH7 73 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ndufa4l2Q4FZG9 87 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ighv1-82A0A0G2JEU7 117 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 P18527 97 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Obox2E9PXV9 151 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 PlaurP35456 327 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Brwd1Q921C3 2304 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ighv1-56A0A0A6YXG2 117 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ifitm6A0A1B0GS75 124 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Fam19a4Q7TPG5 135 aa6.98□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ighv2-6A0A075B6A7 116 aa6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Klk9Q32M27 251 aa6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Cfc1P97766 202 aa6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Hcfc1Q61191 2045 aaKnown RBP6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Zfand3Q497H0 227 aa6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Snai3Q9QY31 287 aa6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Col27a1Q5QNQ9 1845 aa6.97□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Igkv8-28A0A0G2JE47 121 aa6.96□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Col5a1O88207 1838 aa6.96□□□□□ -1.29
Scn8a-213ENSMUST00000201549 RetnlbQ99P86 105 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 OtoglF7A4A7 2325 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv8-5A0A0A6YY60 119 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 P06328 117 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ube2d2P62838 147 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Rnf185Q91YT2 192 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 4930442H23RikQ9D5G7 103 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Znf239P24399 201 aa6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Znf706Q9D115 76 aaKnown RBP6.96□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv2-7A0A075B5Q8 116 aa6.95□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv8-11A0A075B5X4 119 aa6.95□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Reg3aO09037 175 aa6.95□□□□□ -1.3
Scn8a-213ENSMUST00000201549 1810032O08RikE9PZV8 113 aa6.95□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Triap1Q9D8Z2 76 aa6.95□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm14137Q8CE97 175 aa6.94□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Defb10Q8R2I8 73 aa6.94□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Wfdc15aQ8BH89 80 aa6.94□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm43218A0A0G2JGT0 114 aa6.94□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Crip2Q9DCT8 208 aaKnown RBP6.94□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Serp1Q9Z1W5 66 aa6.94□□□□□ -1.3
Scn8a-213ENSMUST00000201549 TeppQ6IMH0 216 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Defb39Q70KL3 74 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv3-3A0A0A6YWL2 116 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv1-61P01749 117 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 P06320 134 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 2310009B15RikA0A0A6YWI4 143 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Plac8l1Q08EJ0 177 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm16223Q8CBM3 117 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 P01820 115 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Cox17P56394 63 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 E130116L18RikQ8BMV6 101 aa6.93□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ovol3D3YYM0 189 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Wfdc12Q9JHY3 85 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 SnurfQ9WU12 71 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv12-3A0A075B5T1 117 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ighv1-53A0A075B5W3 117 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 SbsponQ3UPR9 264 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Cdh23Q99PF4 3354 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Odf1Q61999 247 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Q9CX25 107 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm12353A2AGJ4 60 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Prol1E9PYQ4 312 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Serp2Q6TAW2 65 aa6.92□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm9936Q8C864 160 aa6.91□□□□□ -1.3
Scn8a-213ENSMUST00000201549 CtrlQ9ER05 264 aa6.91□□□□□ -1.3
Scn8a-213ENSMUST00000201549 CenpfE9Q3P4 2997 aaKnown RBP6.91□□□□□ -1.3
Scn8a-213ENSMUST00000201549 TshbP12656 138 aa6.91□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Ntn5Q3UQ22 452 aa6.91□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Odf3Q920N1 254 aa6.91□□□□□ -1.3
Scn8a-213ENSMUST00000201549 4930470P17RikQ9D542 155 aa6.9□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm5629P06327 117 aa6.9□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Dkk4Q8VEJ3 221 aa6.9□□□□□ -1.3
Scn8a-213ENSMUST00000201549 Gm5878E9PUB3 99 aa6.9□□□□□ -1.31
Scn8a-213ENSMUST00000201549 Lama2Q60675 3118 aaKnown RBP6.9□□□□□ -1.31
Scn8a-213ENSMUST00000201549 Trbv16A0A0B4J1H3 115 aa6.9□□□□□ -1.31
Scn8a-213ENSMUST00000201549 Ube2d4D3YUH6 135 aa6.89□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 144.1 ms