RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Spg11Q3UHA3 2430 aa15.83■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gm15557A6PWY0 234 aa15.83■□□□□ 0.12
Sox1-201ENSMUST00000180353 Nsun4C4P6S0 806 aaKnown RBP15.83■□□□□ 0.12
Sox1-201ENSMUST00000180353 Ighv1-72P01751 139 aa15.83■□□□□ 0.12
Sox1-201ENSMUST00000180353 Prh1P05142 261 aa15.82■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gm26566Q8CAC1 153 aa15.82■□□□□ 0.12
Sox1-201ENSMUST00000180353 OtoglF7A4A7 2325 aa15.82■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gm21994F6T2D2 329 aa15.82■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gphb5Q812B2 130 aa15.82■□□□□ 0.12
Sox1-201ENSMUST00000180353 Rpl28P41105 137 aaKnown RBP15.82■□□□□ 0.12
Sox1-201ENSMUST00000180353 PcntP48725 2898 aa15.81■□□□□ 0.12
Sox1-201ENSMUST00000180353 Tm2d2Q8R0I4 213 aa15.81■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gm37988J3QM41 62 aa15.8■□□□□ 0.12
Sox1-201ENSMUST00000180353 Klk11Q9QYN3 276 aa15.8■□□□□ 0.12
Sox1-201ENSMUST00000180353 Ighv2-3A0A075B696 115 aa15.8■□□□□ 0.12
Sox1-201ENSMUST00000180353 Wisp2Q9Z0G4 251 aa15.79■□□□□ 0.12
Sox1-201ENSMUST00000180353 Igkv3-2A0A075B5P0 119 aa15.79■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gm37389A0A0A6YW05 95 aa15.79■□□□□ 0.12
Sox1-201ENSMUST00000180353 Cox6b1P56391 86 aaKnown RBP15.79■□□□□ 0.12
Sox1-201ENSMUST00000180353 4930470P17RikQ9D542 155 aa15.79■□□□□ 0.12
Sox1-201ENSMUST00000180353 Trbv13-2A0A140T8N6 113 aa15.78■□□□□ 0.12
Sox1-201ENSMUST00000180353 Rif1Q6PR54 2419 aaKnown RBP15.78■□□□□ 0.12
Sox1-201ENSMUST00000180353 Gm42715A0A087WP63 3095 aaKnown RBP15.78■□□□□ 0.12
Sox1-201ENSMUST00000180353 Igkv8-18A0A0B4J1J3 123 aa15.77■□□□□ 0.12
Sox1-201ENSMUST00000180353 PtprbB2RU80 1998 aa15.77■□□□□ 0.11
Sox1-201ENSMUST00000180353 Atox1O08997 68 aaKnown RBP15.77■□□□□ 0.11
Sox1-201ENSMUST00000180353 Gm5464Q3UY29 175 aa15.77■□□□□ 0.11
Sox1-201ENSMUST00000180353 Ighv10-1A0A0B4J1J6 119 aa15.76■□□□□ 0.11
Sox1-201ENSMUST00000180353 Dph3Q8K0W9 82 aa15.76■□□□□ 0.11
Sox1-201ENSMUST00000180353 BaalcQ8VHV1 145 aa15.76■□□□□ 0.11
Sox1-201ENSMUST00000180353 Lrp4Q8VI56 1905 aa15.75■□□□□ 0.11
Sox1-201ENSMUST00000180353 Gm10647E9Q8X0 124 aa15.75■□□□□ 0.11
Sox1-201ENSMUST00000180353 Igkv1-88A0A140T8N1 120 aa15.75■□□□□ 0.11
Sox1-201ENSMUST00000180353 GfyJ3KML8 504 aa15.75■□□□□ 0.11
Sox1-201ENSMUST00000180353 LhbO09108 141 aa15.75■□□□□ 0.11
Sox1-201ENSMUST00000180353 BC025920Q3US60 128 aa15.75■□□□□ 0.11
Sox1-201ENSMUST00000180353 AcanQ61282 2132 aaKnown RBP15.74■□□□□ 0.11
Sox1-201ENSMUST00000180353 Tfpi2O35536 230 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 Pla2g2dQ9WVF6 144 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 Fam19a1Q7TPG8 133 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 H2al1bA0A087WP11 105 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 H2al1kJ3QP08 105 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 Gm5153P01627 120 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 H2al1eQ810S6 105 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 H2al1mQ9DAD9 105 aa15.73■□□□□ 0.11
Sox1-201ENSMUST00000180353 Gm12353A2AGJ4 60 aa15.72■□□□□ 0.11
Sox1-201ENSMUST00000180353 Vpreb3D3Z6J4 130 aa15.72■□□□□ 0.11
Sox1-201ENSMUST00000180353 Ntn5Q3UQ22 452 aa15.69■□□□□ 0.1
Sox1-201ENSMUST00000180353 Gm10549Q3URY4 149 aa15.69■□□□□ 0.1
Sox1-201ENSMUST00000180353 E130116L18RikQ8BMV6 101 aa15.68■□□□□ 0.1
Sox1-201ENSMUST00000180353 Ndufs5Q99LY9 106 aa15.68■□□□□ 0.1
Sox1-201ENSMUST00000180353 Gm10845Q3UNY9 185 aa15.68■□□□□ 0.1
Sox1-201ENSMUST00000180353 P01755 137 aa15.68■□□□□ 0.1
Sox1-201ENSMUST00000180353 AcacbE9Q4Z2 2448 aa15.67■□□□□ 0.1
Sox1-201ENSMUST00000180353 NbasE9Q411 2356 aa15.67■□□□□ 0.1
Sox1-201ENSMUST00000180353 Gm9805F6YK59 57 aa15.67■□□□□ 0.1
Sox1-201ENSMUST00000180353 Spint4Q9D263 159 aa15.67■□□□□ 0.1
Sox1-201ENSMUST00000180353 Pcsk5Q04592 1877 aa15.67■□□□□ 0.1
Sox1-201ENSMUST00000180353 Cd164Q9R0L9 197 aa15.66■□□□□ 0.1
Sox1-201ENSMUST00000180353 1700056E22RikF7CNM6 234 aa15.66■□□□□ 0.1
Sox1-201ENSMUST00000180353 Gm17577J3QNF7 156 aa15.66■□□□□ 0.1
Sox1-201ENSMUST00000180353 Cep350E9Q309 3095 aa15.65■□□□□ 0.1
Sox1-201ENSMUST00000180353 Krtap16-1A2A5X5 502 aa15.65■□□□□ 0.1
Sox1-201ENSMUST00000180353 PrcdQ00LT2 53 aa15.65■□□□□ 0.1
Sox1-201ENSMUST00000180353 Trav9n-4A0A075B631 113 aa15.64■□□□□ 0.09
Sox1-201ENSMUST00000180353 Ube2bP63147 152 aa15.64■□□□□ 0.09
Sox1-201ENSMUST00000180353 9530003J23RikQ8BM26 151 aa15.64■□□□□ 0.09
Sox1-201ENSMUST00000180353 Gm11011D3Z3L9 86 aa15.63■□□□□ 0.09
Sox1-201ENSMUST00000180353 Hcfc1Q61191 2045 aaKnown RBP15.63■□□□□ 0.09
Sox1-201ENSMUST00000180353 Igkv8-34A0A0G2JDU0 121 aa15.62■□□□□ 0.09
Sox1-201ENSMUST00000180353 Ovol3D3YYM0 189 aa15.62■□□□□ 0.09
Sox1-201ENSMUST00000180353 Dkk4Q8VEJ3 221 aa15.62■□□□□ 0.09
Sox1-201ENSMUST00000180353 Lmo4P61969 165 aa15.62■□□□□ 0.09
Sox1-201ENSMUST00000180353 Cox7b2Q9D2H1 82 aa15.62■□□□□ 0.09
Sox1-201ENSMUST00000180353 2010109I03RikQ9CQ11 111 aa15.61■□□□□ 0.09
Sox1-201ENSMUST00000180353 Gm10490F6VBM2 120 aa15.61■□□□□ 0.09
Sox1-201ENSMUST00000180353 AI854703Q8BIN3 203 aa15.61■□□□□ 0.09
Sox1-201ENSMUST00000180353 Kiaa1549Q68FD9 1940 aa15.61■□□□□ 0.09
Sox1-201ENSMUST00000180353 Gm5142Q8C5X9 133 aa15.61■□□□□ 0.09
Sox1-201ENSMUST00000180353 A530084C06RikQ3UTW2 186 aa15.6■□□□□ 0.09
Sox1-201ENSMUST00000180353 Sprr3O09116 238 aa15.6■□□□□ 0.09
Sox1-201ENSMUST00000180353 CrygeQ03740 174 aa15.59■□□□□ 0.09
Sox1-201ENSMUST00000180353 Gm10300Q8C8P7 189 aa15.59■□□□□ 0.09
Sox1-201ENSMUST00000180353 Camk2n2Q78WH7 79 aa15.59■□□□□ 0.09
Sox1-201ENSMUST00000180353 Ly6gP35461 111 aa15.59■□□□□ 0.09
Sox1-201ENSMUST00000180353 Ighv1-63A0A075B5X2 117 aa15.58■□□□□ 0.09
Sox1-201ENSMUST00000180353 Ndufb1P0DN34 57 aa15.58■□□□□ 0.09
Sox1-201ENSMUST00000180353 Q9DAB9 146 aa15.58■□□□□ 0.09
Sox1-201ENSMUST00000180353 7530416G11RikJ3QJX6 159 aa15.58■□□□□ 0.08
Sox1-201ENSMUST00000180353 Gm10570F6VB42 170 aa15.58■□□□□ 0.08
Sox1-201ENSMUST00000180353 Dnah12Q3V0Q1 3086 aa15.57■□□□□ 0.08
Sox1-201ENSMUST00000180353 Gm10509O88255 85 aa15.57■□□□□ 0.08
Sox1-201ENSMUST00000180353 UtrnE9Q6R7 3430 aa15.57■□□□□ 0.08
Sox1-201ENSMUST00000180353 4930546C10RikE9Q4Y3 121 aa15.56■□□□□ 0.08
Sox1-201ENSMUST00000180353 Cdc42se2Q8BGH7 84 aa15.56■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ube2aQ9Z255 152 aa15.56■□□□□ 0.08
Sox1-201ENSMUST00000180353 Gm10401E9Q3K6 71 aa15.56■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ufsp1Q9CZP0 217 aa15.55■□□□□ 0.08
Sox1-201ENSMUST00000180353 Gm17521F6QAC8 156 aa15.55■□□□□ 0.08
Sox1-201ENSMUST00000180353 ScxQ64124 207 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 124 ms