RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Igf1P05017 153 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 Ube2g1P62254 170 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 Crebl2Q32M00 123 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 Trav3-1Q5R1I8 114 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 Smim7Q5RKS2 75 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 Tmem70Q921N7 253 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 4930556J24RikQ9D4U7 146 aa5.16□□□□□ -1.58
Trim40-203ENSMUST00000172711 Gm28539A0A087WSL9 92 aa5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 Ighv1-15A0A0A6YXA5 117 aa5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 Gm43218A0A0G2JGT0 114 aa5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 Rpl37aP61514 92 aa5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 1500011B03RikQ3TTH7 73 aa5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 Srsf9Q9D0B0 222 aaKnown RBP5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 Hrct1Q9D6B9 109 aa5.15□□□□□ -1.58
Trim40-203ENSMUST00000172711 Igkv3-12A0A140T8P0 119 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm6970F7DCP6 221 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Emp2O88662 172 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Fgf6P21658 208 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Smim9Q3V0X1 137 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Kcnip4Q6PHZ8 250 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Prss3Q792Z0 246 aaKnown RBP5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 4930519P11RikQ9CUJ8 166 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 EsdQ9R0P3 282 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Timm10bQ9WV96 100 aa5.14□□□□□ -1.59
Trim40-203ENSMUST00000172711 Igkv3-9A0A140T8P4 119 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 P01756 117 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 P01757 117 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Edn1P22387 202 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Ndufa4l2Q4FZG9 87 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm17732E9Q5I2 61 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 SmcpP15265 143 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Igll1P20764 209 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gng4P50153 75 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Defa10P50708 93 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 CnbpP53996 178 aaKnown RBP5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Rpl23P62830 140 aaKnown RBP5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Cox7a2lQ61387 111 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Derl1Q99J56 251 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Tex48Q9DA81 110 aa5.13□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gpr15lA0A0B4J1N3 78 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm9736A0A1W2P7N1 277 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Zfp931A2AHM2 298 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Olfr218E9PWV2 313 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Ssty1P13675 232 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Tmem97Q8VD00 176 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Q9CR34 168 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Josd1Q9DBJ6 202 aa5.12□□□□□ -1.59
Trim40-203ENSMUST00000172711 Ighv2-9A0A075B5Q5 116 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Krtap29-1A2A5X4 342 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm10518F6UQQ9 182 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Scgb2a2J3KMP9 96 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Mtatp8P03930 67 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Prp2P05143 317 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Cox17P56394 63 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Smim6Q3U0I6 56 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Cks1brtQ3UNC9 96 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Olfr509Q8VF20 321 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 SmagpQ99KC7 97 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Cml1Q9JIZ0 222 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Sec11aQ9R0P6 179 aa5.11□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm11213A0A1B0GR83 88 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm5129F6YHA9 99 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 Rpl32P62911 135 aaKnown RBP5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 BtcQ05928 177 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 Fgfbp3Q1HCM0 245 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 Odf3l2Q3TZ65 277 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 AmtQ8CFA2 403 aaKnown RBP5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 Mrpl52Q9D0Y8 121 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 Phlda3Q9WV95 125 aa5.1□□□□□ -1.59
Trim40-203ENSMUST00000172711 H2al2bA9Z055 111 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm20458E9PXJ7 78 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm10065F6TJM2 114 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Evi2aP20934 223 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm12888Q3UW77 119 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Pmis2Q497Q9 96 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Try10Q792Z1 246 aaKnown RBP5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Tspo2Q9CRZ8 162 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Ctnnbip1Q9JJN6 81 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Xlr5cQ9JJR2 179 aa5.09□□□□□ -1.59
Trim40-203ENSMUST00000172711 Gm26602M0QWA4 95 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 CrygaP04345 174 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 Ccl1P10146 92 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 Lgals1P16045 135 aaKnown RBP5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 G0s2Q61585 103 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 Cfap126Q6P8X9 189 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 Scgb3a2Q920H1 91 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 PmvkQ9D1G2 192 aa5.08□□□□□ -1.6
Trim40-203ENSMUST00000172711 Trav12-3A0A075B648 115 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Igkv4-92A0A0B4J1I2 117 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 D6Ertd527eA0A0N4SWI3 464 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Smim20D3Z7Q2 69 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 OdaphJ3QNT8 126 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Gm28044L7N1X0 119 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Ighv1-61P01749 117 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Cd24P24807 76 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Defa9P50707 93 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Mllt11P97783 90 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Tmem213Q08EA8 116 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 Defa23Q5G866 93 aa5.07□□□□□ -1.6
Trim40-203ENSMUST00000172711 BC106179Q8C9L1 186 aa5.07□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms