RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 P01728 117 aa7.06□□□□□ -1.28
Col6a5-201ENSMUST00000165165 9230109A22RikQ8BHE6 111 aa7.06□□□□□ -1.28
Col6a5-201ENSMUST00000165165 C130032M10RikQ8C888 123 aa7.05□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Col4a5Q63ZW6 1691 aa7.05□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Nupr2Q497P3 102 aa7.05□□□□□ -1.28
Col6a5-201ENSMUST00000165165 P01630 113 aa7.05□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Cox8cA6H666 72 aa7.05□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Cspg4Q8VHY0 2327 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Bdp1Q571C7 2467 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Ighv1-61P01749 117 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Dazap2Q9DCP9 168 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Gm11011D3Z3L9 86 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 GrnP28798 589 aaKnown RBP7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 SycnQ8VCK7 134 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Cfap46E9Q2C0 2641 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Sec16aA2AIX1 2377 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Gm17606F6ZL36 78 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 LitafQ9JLJ0 161 aa7.04□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Defb18Q30KP5 85 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Cd27P41272 250 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Odf3l1Q810P2 275 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Ighv2-6A0A075B6A7 116 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 P18527 97 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 P04942 107 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 A230072I06RikQ3UUJ8 172 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Foxs1Q61574 329 aa7.03□□□□□ -1.28
Col6a5-201ENSMUST00000165165 Crip2Q9DCT8 208 aaKnown RBP7.02□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Ighv1-5A0A0A6YWG2 117 aa7.02□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Gm9949Q8C9F4 104 aa7.02□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Q9D131 166 aa7.02□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Map6d1Q14BB9 191 aa7.02□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Wfdc12Q9JHY3 85 aa7.02□□□□□ -1.29
Col6a5-201ENSMUST00000165165 CrygeQ03740 174 aa7.01□□□□□ -1.29
Col6a5-201ENSMUST00000165165 CrygfQ9CXV3 174 aa7.01□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Ndufa4l2Q4FZG9 87 aa7.01□□□□□ -1.29
Col6a5-201ENSMUST00000165165 E130114P18RikF6S0S7 154 aa7.01□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Odf3Q920N1 254 aa7.01□□□□□ -1.29
Col6a5-201ENSMUST00000165165 IgipA0A1B0GR74 53 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Ighv3-3A0A0A6YWL2 116 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 A830031A19RikQ8BNT5 113 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Gm4707V9GXN5 68 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Gm5629P06327 117 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Rspo1Q9Z132 265 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Nav3Q80TN7 2359 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Ighv1-56A0A0A6YXG2 117 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 3110082J24RikF6Z6Z2 108 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 PpdpfQ9CR37 115 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Zfhx2Q2MHN3 2562 aa7□□□□□ -1.29
Col6a5-201ENSMUST00000165165 FshbQ60687 130 aa6.99□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Gm10570F6VB42 170 aa6.99□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Rpl28P41105 137 aaKnown RBP6.99□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Crip1P63254 77 aa6.99□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Q9D8Q6 235 aa6.99□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Jmjd1cQ69ZK6 2350 aa6.99□□□□□ -1.29
Col6a5-201ENSMUST00000165165 P01823 113 aa6.98□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Wisp3D3Z5L9 354 aa6.98□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Trbv13-2A0A140T8N6 113 aa6.98□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Defb37Q7TMD2 62 aa6.97□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Ighv1-75A0A075B5Y2 117 aa6.97□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Wfdc17Q5SSJ1 76 aa6.97□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Gm20538F6Z9R1 75 aa6.97□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Gm12057A0A087WR21 115 aa6.97□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Ighv1-72P01751 139 aa6.96□□□□□ -1.29
Col6a5-201ENSMUST00000165165 P01755 137 aa6.96□□□□□ -1.29
Col6a5-201ENSMUST00000165165 Mp68P56379 58 aa6.96□□□□□ -1.3
Col6a5-201ENSMUST00000165165 A0A286YCN5 57 aa6.96□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Pip4p1Q3TWL2 284 aa6.96□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gm9958Q8C9U4 106 aa6.96□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Bean1Q9EQG5 255 aa6.96□□□□□ -1.3
Col6a5-201ENSMUST00000165165 CtrlQ9ER05 264 aa6.96□□□□□ -1.3
Col6a5-201ENSMUST00000165165 A730009L09RikA0A1B0GS82 72 aa6.95□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Rnf185Q91YT2 192 aa6.95□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ighv2-9-1A0A075B697 116 aa6.95□□□□□ -1.3
Col6a5-201ENSMUST00000165165 P04945 108 aa6.95□□□□□ -1.3
Col6a5-201ENSMUST00000165165 FcorP0DJI6 106 aa6.95□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gm10577Q3UDV9 132 aa6.95□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ifitm6A0A1B0GS75 124 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ighv2-6-8A0A0A6YWY9 116 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Adm2Q7TNK8 150 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 PtprqP0C5E4 2300 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ypel4Q65Z93 127 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gm43218A0A0G2JGT0 114 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 P01820 115 aa6.94□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ly6c2P0CW03 131 aa6.93□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Sprr2jO70561 109 aa6.93□□□□□ -1.3
Col6a5-201ENSMUST00000165165 P04943 107 aa6.93□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Rbx1P62878 108 aa6.93□□□□□ -1.3
Col6a5-201ENSMUST00000165165 AcacbE9Q4Z2 2448 aa6.93□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Ighv2-9A0A075B5Q5 116 aa6.93□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Dopey1Q8BL99 2399 aa6.92□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gm5468Q8C3D3 155 aa6.92□□□□□ -1.3
Col6a5-201ENSMUST00000165165 SnurfQ9WU12 71 aa6.92□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Col8a2P25318 699 aa6.92□□□□□ -1.3
Col6a5-201ENSMUST00000165165 P06329 120 aa6.91□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gpha2Q925Q5 128 aa6.91□□□□□ -1.3
Col6a5-201ENSMUST00000165165 P01674 108 aa6.91□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gm5878E9PUB3 99 aa6.91□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Defb45Q3V490 66 aa6.91□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Gm5153P01627 120 aa6.9□□□□□ -1.3
Col6a5-201ENSMUST00000165165 Spint4Q9D263 159 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 132 ms