RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Nsun4C4P6S0 806 aaKnown RBP13.06□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Nlrc5C3VPR6 1915 aa13.06□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Ighv2-3A0A075B696 115 aa13.06□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Pip4p1Q3TWL2 284 aa13.06□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Gm11011D3Z3L9 86 aa13.05□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Sec16aA2AIX1 2377 aa13.05□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Atg2aQ6P4T0 1914 aa13.05□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Dkk4Q8VEJ3 221 aa13.04□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Rai1Q61818 1889 aa13.04□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Arhgef17Q80U35 2057 aa13.04□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Itgb4A2A863 1818 aa13.04□□□□□ -0.32
Pcf11-201ENSMUST00000119954 TshbP12656 138 aa13.04□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Apoc4Q61268 124 aa13.03□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Plxnb1Q8CJH3 2119 aa13.02□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Sorl1O88307 2215 aaKnown RBP13.02□□□□□ -0.32
Pcf11-201ENSMUST00000119954 P01755 137 aa13.02□□□□□ -0.32
Pcf11-201ENSMUST00000119954 Ncor1Q60974 2453 aa13.02□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Ighv1-72P01751 139 aa13.01□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Ighv1-66A0A075B5X5 117 aa13.01□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Obsl1D3YYU8 1804 aaKnown RBP13.01□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Prr14lE9Q7C4 1971 aa13□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Smrp1Q2MH31 260 aa13□□□□□ -0.33
Pcf11-201ENSMUST00000119954 1520401A03RikA0A0J9YVH6 598 aa13□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Gvin1Q80SU7 2427 aa13□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Trbv13-2A0A140T8N6 113 aa13□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Gm9887F6RFI0 207 aa12.99□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Bcorl1A2AQH4 1781 aa12.98□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Gm10322F7D7I4 111 aa12.98□□□□□ -0.33
Pcf11-201ENSMUST00000119954 1700011M02RikB1AX35 88 aa12.98□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Med13lQ6JPI3 2207 aa12.97□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Igkv8-28A0A0G2JE47 121 aa12.97□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Spry4Q9WTP2 300 aa12.97□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Ighv3-3A0A0A6YWL2 116 aa12.97□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Ly6g6cQ9Z1Q4 126 aa12.97□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Prr12E9PYL2 2035 aaKnown RBP12.96□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Wfdc12Q9JHY3 85 aa12.96□□□□□ -0.33
Pcf11-201ENSMUST00000119954 Polr2kQ63871 58 aa12.96□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Gm16223Q8CBM3 117 aa12.96□□□□□ -0.34
Pcf11-201ENSMUST00000119954 UqcrqQ9CQ69 82 aa12.96□□□□□ -0.34
Pcf11-201ENSMUST00000119954 A0A286YCN5 57 aa12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Znf706Q9D115 76 aaKnown RBP12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Gm10267M0QWD8 85 aa12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Eml5Q8BQM8 1977 aa12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Lce6aD3YV94 81 aa12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 SycnQ8VCK7 134 aa12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Gm6899Q3USS0 134 aa12.95□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Dido1Q8C9B9 2256 aaKnown RBP12.94□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Wfdc13Q5DQQ6 81 aa12.94□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Ube2d2P62838 147 aa12.94□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Pla2g2dQ9WVF6 144 aa12.94□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Ighv1-59A0A0A6YXE0 117 aa12.94□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Gm21748Q3UE70 102 aa12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Sprr2jO70561 109 aa12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Cyyr1Q8VIH7 165 aa12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Pla2g1bQ9Z0Y2 146 aa12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Tet1Q3URK3 2007 aaKnown RBP12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Prrc2aQ7TSC1 2158 aaKnown RBP12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 SonQ9QX47 2444 aaKnown RBP12.93□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Arhgap21Q6DFV3 1944 aa12.92□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Defb38Q7TNV7 63 aa12.91□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Chchd7Q8K2Q5 85 aa12.91□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Col4a5Q63ZW6 1691 aa12.91□□□□□ -0.34
Pcf11-201ENSMUST00000119954 1600014C23RikQ9DAX4 101 aa12.9□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Lmo4P61969 165 aa12.9□□□□□ -0.34
Pcf11-201ENSMUST00000119954 4930524J08RikQ9CUJ5 163 aa12.9□□□□□ -0.34
Pcf11-201ENSMUST00000119954 CdsnQ7TPC1 561 aa12.9□□□□□ -0.34
Pcf11-201ENSMUST00000119954 Ifitm6A0A1B0GS75 124 aa12.9□□□□□ -0.35
Pcf11-201ENSMUST00000119954 SrarpQ3ULG3 163 aa12.89□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Ovol3D3YYM0 189 aa12.88□□□□□ -0.35
Pcf11-201ENSMUST00000119954 CnfnQ6PCW6 111 aa12.88□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Gm28374F6SG70 93 aa12.88□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Gm9925F6T2U3 160 aa12.87□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Tmem131O70472 1877 aa12.87□□□□□ -0.35
Pcf11-201ENSMUST00000119954 SnurfQ9WU12 71 aa12.87□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Rpl28P41105 137 aaKnown RBP12.86□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Pla2g2eQ9QUL3 142 aa12.86□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Gm10226O88253 85 aa12.85□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Shisa2Q8QZV2 295 aa12.85□□□□□ -0.35
Pcf11-201ENSMUST00000119954 4930556J24RikQ9D4U7 146 aa12.84□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Gm8439G3UWA7 96 aa12.84□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Cdc42se2Q8BGH7 84 aa12.84□□□□□ -0.35
Pcf11-201ENSMUST00000119954 E130116L18RikQ8BMV6 101 aa12.84□□□□□ -0.35
Pcf11-201ENSMUST00000119954 Nup210lQ9D2F7 1881 aa12.83□□□□□ -0.35
Pcf11-201ENSMUST00000119954 PrlhG3UWC3 86 aa12.83□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Gm10490F6VBM2 120 aa12.83□□□□□ -0.36
Pcf11-201ENSMUST00000119954 C130032M10RikQ8C888 123 aa12.83□□□□□ -0.36
Pcf11-201ENSMUST00000119954 P06329 120 aa12.83□□□□□ -0.36
Pcf11-201ENSMUST00000119954 TroQ6DIC6 2087 aa12.82□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Col5a3Q9JLI2 1739 aa12.82□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Gm5142Q8C5X9 133 aa12.82□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Defb10Q8R2I8 73 aa12.82□□□□□ -0.36
Pcf11-201ENSMUST00000119954 4930432M17RikQ3V0W9 174 aa12.81□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Gm26566Q8CAC1 153 aa12.81□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Brwd1Q921C3 2304 aa12.81□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Gm10845Q3UNY9 185 aa12.81□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Crip2Q9DCT8 208 aaKnown RBP12.81□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Fhl2O70433 279 aa12.8□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Adm2Q7TNK8 150 aa12.8□□□□□ -0.36
Pcf11-201ENSMUST00000119954 Wisp2Q9Z0G4 251 aa12.8□□□□□ -0.36
Pcf11-201ENSMUST00000119954 TeppQ6IMH0 216 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 254.8 ms