RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Gm21060J3KMU4 56 aa12.38□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Ighv1-75A0A075B5Y2 117 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Gm5878E9PUB3 99 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 TshbP12656 138 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Shisa2Q8QZV2 295 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Gm26602M0QWA4 95 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Fhl2O70433 279 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Defb38Q7TNV7 63 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 EnhoQ8K1D8 76 aa12.37□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Odf3Q920N1 254 aa12.36□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Adm2Q7TNK8 150 aa12.36□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Gm28374F6SG70 93 aa12.36□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Ly6gP35461 111 aa12.36□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Notch3Q61982 2318 aa12.36□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Gm12689Q8BQU9 117 aa12.35□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Igf1P05017 153 aa12.35□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Ighv8-5A0A0A6YY60 119 aa12.35□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Sorl1O88307 2215 aaKnown RBP12.35□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Znf575Q3TXZ1 239 aa12.34□□□□□ -0.43
Shroom3-201ENSMUST00000113051 H2al1aQ5M8Q2 105 aa12.34□□□□□ -0.43
Shroom3-201ENSMUST00000113051 H2al1eQ810S6 105 aa12.34□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Pcsk5Q04592 1877 aa12.34□□□□□ -0.43
Shroom3-201ENSMUST00000113051 Plxnb3Q9QY40 1902 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Rbx1P62878 108 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Ovol3D3YYM0 189 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Gm8439G3UWA7 96 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Lypd6Q8BPP5 171 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Gm5629P06327 117 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Ube2d2P62838 147 aa12.33□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Tet2Q4JK59 1912 aaKnown RBP12.32□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Igkv8-28A0A0G2JE47 121 aa12.32□□□□□ -0.44
Shroom3-201ENSMUST00000113051 D730001G18RikA0A087WQU7 115 aa12.31□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Gm16223Q8CBM3 117 aa12.31□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Q9DAQ5 155 aa12.31□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Vpreb2P13373 142 aa12.31□□□□□ -0.44
Shroom3-201ENSMUST00000113051 H2al1bA0A087WP11 105 aa12.31□□□□□ -0.44
Shroom3-201ENSMUST00000113051 P84750 121 aa12.3□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Gm3285A0A1W2P7U0 201 aa12.3□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Prrc2aQ7TSC1 2158 aaKnown RBP12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Spg11Q3UHA3 2430 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 H2al1mQ9DAD9 105 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Ube2d4D3YUH6 135 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Tmem254aP0DN89 123 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Tmem254bP0DN90 123 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Tmem254cP0DN91 123 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 C2cd3Q52KB6 2323 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Pcnx3Q8VI59 2028 aa12.29□□□□□ -0.44
Shroom3-201ENSMUST00000113051 PtprsB0V2N1 1907 aa12.28□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Gm10490F6VBM2 120 aa12.28□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Cspg4Q8VHY0 2327 aa12.28□□□□□ -0.44
Shroom3-201ENSMUST00000113051 AgrnA2ASQ1 1950 aa12.28□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Gm11011D3Z3L9 86 aa12.27□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Ighv1-61P01749 117 aa12.27□□□□□ -0.44
Shroom3-201ENSMUST00000113051 Eif4ebp1Q60876 117 aa12.27□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Gm21748Q3UE70 102 aa12.27□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Dopey1Q8BL99 2399 aa12.26□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Rnf185Q91YT2 192 aa12.26□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Gm9887F6RFI0 207 aa12.26□□□□□ -0.45
Shroom3-201ENSMUST00000113051 P0C913 63 aa12.26□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Apoc4Q61268 124 aa12.26□□□□□ -0.45
Shroom3-201ENSMUST00000113051 P01823 113 aa12.25□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Trbv13-2A0A140T8N6 113 aa12.25□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Smim20D3Z7Q2 69 aa12.25□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Gm10267M0QWD8 85 aa12.25□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Defb42Q8BVB5 75 aa12.25□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Crip2Q9DCT8 208 aaKnown RBP12.24□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Wfdc17Q5SSJ1 76 aa12.24□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Ighv8-11A0A075B5X4 119 aa12.24□□□□□ -0.45
Shroom3-201ENSMUST00000113051 9230102O04RikA2ASX7 82 aa12.24□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Znf239P24399 201 aa12.23□□□□□ -0.45
Shroom3-201ENSMUST00000113051 CrygeQ03740 174 aa12.23□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Col4a4Q9QZR9 1682 aa12.23□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Ighv2-6-8A0A0A6YWY9 116 aa12.23□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Pcnx2Q5DU28 2122 aa12.23□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Defb39Q70KL3 74 aa12.23□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Cox8cA6H666 72 aa12.22□□□□□ -0.45
Shroom3-201ENSMUST00000113051 BaalcQ8VHV1 145 aa12.22□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Psmb11Q8BG41 302 aa12.21□□□□□ -0.45
Shroom3-201ENSMUST00000113051 Rpl28P41105 137 aaKnown RBP12.21□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Pde6gP09174 87 aa12.21□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Tax1bp3Q9DBG9 124 aa12.21□□□□□ -0.46
Shroom3-201ENSMUST00000113051 TeppQ6IMH0 216 aa12.2□□□□□ -0.46
Shroom3-201ENSMUST00000113051 4930564D02RikQ9D4S4 103 aa12.2□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Znf706Q9D115 76 aaKnown RBP12.2□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Ighv1-66A0A075B5X5 117 aa12.2□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Psmb8P28063 276 aa12.19□□□□□ -0.46
Shroom3-201ENSMUST00000113051 P01659 112 aa12.19□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Brwd1Q921C3 2304 aa12.19□□□□□ -0.46
Shroom3-201ENSMUST00000113051 OtoglF7A4A7 2325 aa12.18□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Ndufb1P0DN34 57 aa12.17□□□□□ -0.46
Shroom3-201ENSMUST00000113051 TroQ6DIC6 2087 aa12.15□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Dido1Q8C9B9 2256 aaKnown RBP12.15□□□□□ -0.46
Shroom3-201ENSMUST00000113051 Gm1968Q3T9I3 115 aa12.14□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Fgfbp3Q1HCM0 245 aa12.14□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Ramp1Q9WTJ5 148 aa12.14□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Gm5468Q8C3D3 155 aa12.13□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Wdr38Q9D994 303 aa12.13□□□□□ -0.47
Shroom3-201ENSMUST00000113051 PpdpfQ9CR37 115 aa12.12□□□□□ -0.47
Shroom3-201ENSMUST00000113051 1700011M02RikB1AX35 88 aa12.12□□□□□ -0.47
Shroom3-201ENSMUST00000113051 Cd164l2Q9D6W7 172 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 481 ms