RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Igkv8-28A0A0G2JE47 121 aa11.93□□□□□ -0.5
Ubr3-201ENSMUST00000055758 BtcQ05928 177 aa11.93□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P01643 108 aa11.93□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Snai3Q9QY31 287 aa11.93□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Rbx1P62878 108 aa11.92□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P01747 120 aa11.92□□□□□ -0.5
Ubr3-201ENSMUST00000055758 2010109I03RikQ9CQ11 111 aa11.92□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ly6hQ9WUC3 139 aa11.92□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P18527 97 aa11.92□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ntf4Q80VU4 209 aa11.92□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P06328 117 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm19935A0A1B0GSF9 52 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm15557A6PWY0 234 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 C1qcQ02105 246 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 A130051J06RikQ8CAU1 227 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ighv8-11A0A075B5X4 119 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Fxyd5P97808 178 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Csdc2Q91YQ3 154 aa11.91□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm12216A0A1W2P827 62 aa11.89□□□□□ -0.51
Ubr3-201ENSMUST00000055758 PlaurP35456 327 aa11.89□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Ighv1-11A0A0A6YWI9 117 aa11.89□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Thsd7bQ6P4U0 1607 aa11.89□□□□□ -0.51
Ubr3-201ENSMUST00000055758 A0A286YE49 62 aa11.88□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Ighv2-6A0A075B6A7 116 aa11.88□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Col8a2P25318 699 aa11.88□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Spry2Q9QXV8 315 aa11.87□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Gm20708H3BKF4 155 aa11.87□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Odf3l1Q810P2 275 aa11.87□□□□□ -0.51
Ubr3-201ENSMUST00000055758 P01674 108 aa11.87□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Ndufa4l2Q4FZG9 87 aa11.87□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Fam19a5Q91WE9 132 aa11.86□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Cd27P41272 250 aa11.86□□□□□ -0.51
Ubr3-201ENSMUST00000055758 4930564D02RikQ9D4S4 103 aa11.86□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Ighv12-3A0A075B5T1 117 aa11.85□□□□□ -0.51
Ubr3-201ENSMUST00000055758 Wfdc13Q5DQQ6 81 aa11.85□□□□□ -0.51
Ubr3-201ENSMUST00000055758 P01729 129 aa11.83□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Odf3Q920N1 254 aa11.83□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Wfdc15aQ8BH89 80 aa11.82□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Ighv1-85A0A075B5Y6 117 aa11.82□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Obox2E9PXV9 151 aa11.82□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Gm5629P06327 117 aa11.81□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Tcte2E9PY37 120 aa11.81□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Defb37Q7TMD2 62 aa11.81□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Ube2d2P62838 147 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Gm5468Q8C3D3 155 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Dazap2Q9DCP9 168 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Gm21060J3KMU4 56 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Gm17606F6ZL36 78 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 CrygeQ03740 174 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 CrygfQ9CXV3 174 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Fgf23Q9EPC2 251 aa11.8□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Ovol3D3YYM0 189 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Gm9913Q8BQQ2 135 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 CtrlQ9ER05 264 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Igkv8-19A0A0G2JFN8 121 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 P04944 107 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Eif4ebp1Q60876 117 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Q8K1L6 76 aa11.79□□□□□ -0.52
Ubr3-201ENSMUST00000055758 LhbO09108 141 aa11.78□□□□□ -0.52
Ubr3-201ENSMUST00000055758 FcorP0DJI6 106 aa11.78□□□□□ -0.52
Ubr3-201ENSMUST00000055758 C130032M10RikQ8C888 123 aa11.78□□□□□ -0.52
Ubr3-201ENSMUST00000055758 P04943 107 aa11.77□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Gm6899Q3USS0 134 aa11.77□□□□□ -0.52
Ubr3-201ENSMUST00000055758 Crip2Q9DCT8 208 aaKnown RBP11.77□□□□□ -0.52
Ubr3-201ENSMUST00000055758 MsmpB1AWI6 139 aa11.77□□□□□ -0.53
Ubr3-201ENSMUST00000055758 P01728 117 aa11.77□□□□□ -0.53
Ubr3-201ENSMUST00000055758 CstadQ9D245 104 aa11.77□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Ighv3-3A0A0A6YWL2 116 aa11.76□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Ighv1-56A0A0A6YXG2 117 aa11.76□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Gm43218A0A0G2JGT0 114 aa11.75□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Znf706Q9D115 76 aaKnown RBP11.74□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Gm10647E9Q8X0 124 aa11.74□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Golgb1E9PVZ8 3238 aa11.73□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Gm9958Q8C9U4 106 aa11.73□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Wfdc12Q9JHY3 85 aa11.72□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Ighv1-72P01751 139 aa11.72□□□□□ -0.53
Ubr3-201ENSMUST00000055758 9130230L23RikQ8CC80 163 aa11.72□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Mp68P56379 58 aa11.71□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Ypel4Q65Z93 127 aa11.71□□□□□ -0.53
Ubr3-201ENSMUST00000055758 Rnf185Q91YT2 192 aa11.71□□□□□ -0.53
Ubr3-201ENSMUST00000055758 A230072I06RikQ3UUJ8 172 aa11.71□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Gm11011D3Z3L9 86 aa11.7□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Gm10570F6VB42 170 aa11.7□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Ighv1-61P01749 117 aa11.7□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Map6d1Q14BB9 191 aa11.7□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Ighv1-75A0A075B5Y2 117 aa11.69□□□□□ -0.54
Ubr3-201ENSMUST00000055758 A0A286YCN5 57 aa11.69□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Zfand3Q497H0 227 aa11.69□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Pip4p1Q3TWL2 284 aa11.69□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Gm16223Q8CBM3 117 aa11.69□□□□□ -0.54
Ubr3-201ENSMUST00000055758 A830031A19RikQ8BNT5 113 aa11.68□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Gm5878E9PUB3 99 aa11.68□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Trbv13-2A0A140T8N6 113 aa11.68□□□□□ -0.54
Ubr3-201ENSMUST00000055758 A730009L09RikA0A1B0GS82 72 aa11.68□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Q9D8Q6 235 aa11.68□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Defb18Q30KP5 85 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Nupr2Q497P3 102 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Bean1Q9EQG5 255 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Wfdc11A2A5H7 82 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 P01820 115 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms