RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Wdr38Q9D994 303 aa6.7□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Q8C708 225 aa6.7□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Defb37Q7TMD2 62 aa6.7□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Ighv8-5A0A0A6YY60 119 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Loxl1P97873 607 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Pla2g1bQ9Z0Y2 146 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm17324Q8C6J8 137 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Ighv1-85A0A075B5Y6 117 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 A230072I06RikQ3UUJ8 172 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm14137Q8CE97 175 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 E130114P18RikF6S0S7 154 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 NpyP57774 97 aa6.69□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm20538F6Z9R1 75 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 P01747 120 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm19935A0A1B0GSF9 52 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm15217A2CG07 155 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Dazap2Q9DCP9 168 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Ighv3-3A0A0A6YWL2 116 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 C130032M10RikQ8C888 123 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Q08AU9 97 aa6.68□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Myo9aQ8C170 2542 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 P01823 113 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 CrygeQ03740 174 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Ntf4Q80VU4 209 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 CrygfQ9CXV3 174 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Q9DAQ5 155 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm44965A0A0N4SVR3 59 aa6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Crip2Q9DCT8 208 aaKnown RBP6.67□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm11011D3Z3L9 86 aa6.66□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Triap1Q9D8Z2 76 aa6.66□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Tnfrsf13bQ9ET35 249 aa6.66□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Gm12057A0A087WR21 115 aa6.66□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Adm2Q7TNK8 150 aa6.66□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Fhl3Q9R059 289 aa6.66□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Ly6hQ9WUC3 139 aa6.65□□□□□ -1.34
Polr1a-201ENSMUST00000055296 A0A286YCN5 57 aa6.65□□□□□ -1.34
Polr1a-201ENSMUST00000055296 OtoglF7A4A7 2325 aa6.65□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Ly6gP35461 111 aa6.65□□□□□ -1.34
Polr1a-201ENSMUST00000055296 Nav2E9Q842 2432 aa6.65□□□□□ -1.34
Polr1a-201ENSMUST00000055296 A830031A19RikQ8BNT5 113 aa6.65□□□□□ -1.35
Polr1a-201ENSMUST00000055296 1600014C23RikQ9DAX4 101 aa6.65□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Fhl2O70433 279 aa6.65□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Eif4ebp1Q60876 117 aa6.65□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Zfp462B1AWL2 2495 aaKnown RBP6.65□□□□□ -1.35
Polr1a-201ENSMUST00000055296 C1qcQ02105 246 aa6.65□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Ighv2-9-1A0A075B697 116 aa6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Mp68P56379 58 aa6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Rpl28P41105 137 aaKnown RBP6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 GrnP28798 589 aaKnown RBP6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm43218A0A0G2JGT0 114 aa6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Prol1E9PYQ4 312 aa6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Wfdc12Q9JHY3 85 aa6.64□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Cox8cA6H666 72 aa6.63□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Col5a3Q9JLI2 1739 aa6.63□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Notch2O35516 2470 aa6.63□□□□□ -1.35
Polr1a-201ENSMUST00000055296 P06328 117 aa6.63□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Ighv2-9A0A075B5Q5 116 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Map6d1Q14BB9 191 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Ighv8-11A0A075B5X4 119 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Hivep2Q3UHF7 2430 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 P01728 117 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Ighv2-6A0A075B6A7 116 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 P18527 97 aa6.62□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm28374F6SG70 93 aa6.61□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Bean1Q9EQG5 255 aa6.61□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm6899Q3USS0 134 aa6.61□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm9949Q8C9F4 104 aa6.6□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm10762Q9CZN6 115 aa6.6□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm1968Q3T9I3 115 aa6.6□□□□□ -1.35
Polr1a-201ENSMUST00000055296 9230109A22RikQ8BHE6 111 aa6.6□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Ly6g6cQ9Z1Q4 126 aa6.59□□□□□ -1.35
Polr1a-201ENSMUST00000055296 MsmpB1AWI6 139 aa6.59□□□□□ -1.35
Polr1a-201ENSMUST00000055296 P06329 120 aa6.59□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Q9D8Q6 235 aa6.59□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Snai3Q9QY31 287 aa6.59□□□□□ -1.35
Polr1a-201ENSMUST00000055296 BtcQ05928 177 aa6.59□□□□□ -1.35
Polr1a-201ENSMUST00000055296 Gm10570F6VB42 170 aa6.59□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Rbx1P62878 108 aa6.59□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Igkv8-27A0A0G2JF28 120 aa6.58□□□□□ -1.36
Polr1a-201ENSMUST00000055296 P0C913 63 aa6.58□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Ighv1-5A0A0A6YWG2 117 aa6.58□□□□□ -1.36
Polr1a-201ENSMUST00000055296 A730009L09RikA0A1B0GS82 72 aa6.57□□□□□ -1.36
Polr1a-201ENSMUST00000055296 CtrlQ9ER05 264 aa6.57□□□□□ -1.36
Polr1a-201ENSMUST00000055296 AplnQ9R0R4 77 aa6.57□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Defb39Q70KL3 74 aa6.57□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Lrp4Q8VI56 1905 aa6.57□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Shisa2Q8QZV2 295 aa6.57□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Gm9958Q8C9U4 106 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 P04945 108 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Pip4p1Q3TWL2 284 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 P01674 108 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 P04940 107 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 P04941 107 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Q9D131 166 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Ighv2-6-8A0A0A6YWY9 116 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Ighv1-61P01749 117 aa6.56□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Trbv13-2A0A140T8N6 113 aa6.55□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Odf3l1Q810P2 275 aa6.55□□□□□ -1.36
Polr1a-201ENSMUST00000055296 NrgnP60761 78 aa6.55□□□□□ -1.36
Polr1a-201ENSMUST00000055296 Ighv1-72P01751 139 aa6.55□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms