RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Trav9n-4A0A075B631 113 aa12.47□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Wnk1P83741 2377 aa12.47□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Sslp1Q3UN54 99 aa12.47□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Ighv2-7A0A075B5Q8 116 aa12.46□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Trbv13-2A0A140T8N6 113 aa12.46□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Eif4ebp1Q60876 117 aa12.46□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Tm2d2Q8R0I4 213 aa12.46□□□□□ -0.41
Col17a1-201ENSMUST00000026045 P01820 115 aa12.46□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Gm5153P01627 120 aa12.45□□□□□ -0.42
Col17a1-201ENSMUST00000026045 TshbP12656 138 aa12.45□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Crip2Q9DCT8 208 aaKnown RBP12.45□□□□□ -0.42
Col17a1-201ENSMUST00000026045 TeppQ6IMH0 216 aa12.45□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Spint4Q9D263 159 aa12.45□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Flg2Q2VIS4 2362 aa12.45□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Tns1E9Q0S6 1888 aaKnown RBP12.44□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Igkv4-92A0A0B4J1I2 117 aa12.44□□□□□ -0.42
Col17a1-201ENSMUST00000026045 OtoglF7A4A7 2325 aa12.44□□□□□ -0.42
Col17a1-201ENSMUST00000026045 AcacbE9Q4Z2 2448 aa12.44□□□□□ -0.42
Col17a1-201ENSMUST00000026045 E130116L18RikQ8BMV6 101 aa12.44□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Igkv8-34A0A0G2JDU0 121 aa12.43□□□□□ -0.42
Col17a1-201ENSMUST00000026045 P01823 113 aa12.43□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Lmo4P61969 165 aa12.43□□□□□ -0.42
Col17a1-201ENSMUST00000026045 CnfnQ6PCW6 111 aa12.43□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Pip4p1Q3TWL2 284 aa12.43□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Piezo1E2JF22 2547 aa12.43□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Q9CX25 107 aa12.42□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Gm17577J3QNF7 156 aa12.42□□□□□ -0.42
Col17a1-201ENSMUST00000026045 1810032O08RikE9PZV8 113 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Tcl1b3P56842 122 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Gm10577Q3UDV9 132 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 4930518I15RikQ3V2W7 57 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Lrp4Q8VI56 1905 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Ighv10-1A0A0B4J1J6 119 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 P84751 237 aa12.41□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Ighv1-82A0A0G2JEU7 117 aa12.4□□□□□ -0.42
Col17a1-201ENSMUST00000026045 4930524J08RikQ9CUJ5 163 aa12.4□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Pglyrp1O88593 182 aa12.4□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Gm17521F6QAC8 156 aa12.4□□□□□ -0.42
Col17a1-201ENSMUST00000026045 Gm26566Q8CAC1 153 aa12.39□□□□□ -0.43
Col17a1-201ENSMUST00000026045 GfyJ3KML8 504 aa12.39□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Ntn5Q3UQ22 452 aa12.39□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Polr2kQ63871 58 aa12.39□□□□□ -0.43
Col17a1-201ENSMUST00000026045 SbsponQ3UPR9 264 aa12.39□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Gm11011D3Z3L9 86 aa12.38□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Ighv1-62-1A0A075B5U3 116 aa12.38□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Igkv8-18A0A0B4J1J3 123 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Gm10401E9Q3K6 71 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 NbasE9Q411 2356 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Ighv1-72P01751 139 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Cox7b2Q9D2H1 82 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 4930546C10RikE9Q4Y3 121 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Gm10735Q3US96 136 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Camk2n2Q78WH7 79 aa12.37□□□□□ -0.43
Col17a1-201ENSMUST00000026045 ScxQ64124 207 aa12.36□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Fhl1P97447 280 aaKnown RBP12.36□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Pla2g2dQ9WVF6 144 aa12.36□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Fam19a1Q7TPG8 133 aa12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 1700011M02RikB1AX35 88 aa12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Sprr3O09116 238 aa12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 PrcdQ00LT2 53 aa12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 1700074P13RikQ9D9G7 251 aa12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Cox7bP56393 80 aa12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Sorl1O88307 2215 aaKnown RBP12.35□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Gm9805F6YK59 57 aa12.34□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Ep400Q8CHI8 3072 aaKnown RBP12.34□□□□□ -0.43
Col17a1-201ENSMUST00000026045 Tln1P26039 2541 aaKnown RBP12.33□□□□□ -0.44
Col17a1-201ENSMUST00000026045 A530084C06RikQ3UTW2 186 aa12.32□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Ighv1-5A0A0A6YWG2 117 aa12.32□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Gm10570F6VB42 170 aa12.32□□□□□ -0.44
Col17a1-201ENSMUST00000026045 DscamQ9ERC8 2013 aa12.31□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Gm10647E9Q8X0 124 aa12.31□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Ighv1-66A0A075B5X5 117 aa12.31□□□□□ -0.44
Col17a1-201ENSMUST00000026045 A830005F24RikQ8BRT5 167 aa12.31□□□□□ -0.44
Col17a1-201ENSMUST00000026045 2010109I03RikQ9CQ11 111 aa12.31□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Klk11Q9QYN3 276 aa12.31□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Rpl28P41105 137 aaKnown RBP12.3□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Wfdc10Q3V2J9 124 aa12.3□□□□□ -0.44
Col17a1-201ENSMUST00000026045 4930564D02RikQ9D4S4 103 aa12.3□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Brwd1Q921C3 2304 aa12.3□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Fgfbp3Q1HCM0 245 aa12.29□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Igkv1-110A0A0B4J1I0 119 aa12.29□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Igkv1-117A0A140T8M0 119 aa12.29□□□□□ -0.44
Col17a1-201ENSMUST00000026045 B430305J03RikQ8BQQ8 176 aa12.29□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Ufsp1Q9CZP0 217 aa12.28□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Gm9925F6T2U3 160 aa12.28□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Gm10322F7D7I4 111 aa12.28□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Rnase1P00683 149 aa12.28□□□□□ -0.44
Col17a1-201ENSMUST00000026045 Gm10197F6QEY5 67 aa12.27□□□□□ -0.45
Col17a1-201ENSMUST00000026045 P01755 137 aa12.27□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Arhgap32Q811P8 2089 aa12.26□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Ighv3-3A0A0A6YWL2 116 aa12.26□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Pla2g2cP48076 150 aa12.25□□□□□ -0.45
Col17a1-201ENSMUST00000026045 A0A286YE49 62 aa12.25□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Gm42715A0A087WP63 3095 aaKnown RBP12.25□□□□□ -0.45
Col17a1-201ENSMUST00000026045 P01819 144 aa12.24□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Defb40Q70KL2 73 aa12.24□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Gm10845Q3UNY9 185 aa12.24□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Esm1Q9QYY7 184 aa12.23□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Prrc2aQ7TSC1 2158 aaKnown RBP12.23□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Krtap16-1A2A5X5 502 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms