RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Ncoa6Q9JL19 2067 aa6.77□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm16223Q8CBM3 117 aa6.77□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Ube2d1P61080 147 aaKnown RBP6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Igkv8-30A0A140T8M3 121 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Smim1P0C8K7 78 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 SycnQ8VCK7 134 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Atox1O08997 68 aaKnown RBP6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm1968Q3T9I3 115 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 H2al1bA0A087WP11 105 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 1700056E22RikF7CNM6 234 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm10322F7D7I4 111 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Smrp1Q2MH31 260 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Wdr38Q9D994 303 aa6.76□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 CadB2RQC6 2225 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Jmjd1cQ69ZK6 2350 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 A0A286YCN5 57 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 LhbO09108 141 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 BaalcQ8VHV1 145 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 ScxQ64124 207 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Defb42Q8BVB5 75 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm12057A0A087WR21 115 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Pou2af1Q64693 256 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Wfdc12Q9JHY3 85 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Polr2kQ63871 58 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 CrygfQ9CXV3 174 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Col6a4A2AX52 2309 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 P06329 120 aa6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Znf706Q9D115 76 aaKnown RBP6.75□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Arhgef17Q80U35 2057 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm28539A0A087WSL9 92 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Defb40Q70KL2 73 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 CnfnQ6PCW6 111 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Sptan1P16546 2472 aaKnown RBP6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Igkv3-12A0A140T8P0 119 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Col4a4Q9QZR9 1682 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 AgrnA2ASQ1 1950 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Sox16Q62247 57 aa6.74□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm11011D3Z3L9 86 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Ncor1Q60974 2453 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Cyyr1Q8VIH7 165 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gpha2Q925Q5 128 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm10509O88255 85 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm10577Q3UDV9 132 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Psmb11Q8BG41 302 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Ube2d3P61079 147 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Ube2d2P62838 147 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm6899Q3USS0 134 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 H2al1aQ5M8Q2 105 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 H2al1eQ810S6 105 aa6.73□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 1700011M02RikB1AX35 88 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Ovol3D3YYM0 189 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 AtrxQ61687 2476 aaKnown RBP6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 BtcQ05928 177 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm9922Q8C3P1 144 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Ndufs5Q99LY9 106 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Prpf8Q99PV0 2335 aaKnown RBP6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 F5O88783 2183 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Gm9767G3X930 207 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Vpreb1P13372 142 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Defb2P82020 71 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 4930564D02RikQ9D4S4 103 aa6.72□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 TectaO08523 2155 aa6.71□□□□□ -1.33
Pdgfra-201ENSMUST00000000476 Tet2Q4JK59 1912 aaKnown RBP6.71□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Cdc42se2Q8BGH7 84 aa6.71□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Ighv8-11A0A075B5X4 119 aa6.71□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Gm21748Q3UE70 102 aa6.71□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Ndufb1P0DN34 57 aa6.7□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Trbv13-2A0A140T8N6 113 aa6.7□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Serp2Q6TAW2 65 aa6.7□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 CenpeQ6RT24 2474 aaKnown RBP6.7□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Rpl28P41105 137 aaKnown RBP6.7□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Pla2g1bQ9Z0Y2 146 aa6.69□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 A0A286YE49 62 aa6.69□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Wfdc13Q5DQQ6 81 aa6.69□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 B430305J03RikQ8BQQ8 176 aa6.69□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Shisa2Q8QZV2 295 aa6.69□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Ighv2-9-1A0A075B697 116 aa6.68□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 P84750 121 aa6.68□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 CrygeQ03740 174 aa6.68□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 A930009A15RikG3UYI6 118 aa6.68□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 D730001G18RikA0A087WQU7 115 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Cd27P41272 250 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Abca4O35600 2310 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 NpwA0A1L1STR8 176 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 B230217C12RikE9Q3Z1 139 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 CenpwQ3URR0 86 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 4930556J24RikQ9D4U7 146 aa6.67□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Krtap27-1E9PX37 202 aa6.66□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Adamts20P59511 1906 aa6.66□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Trav14-1A0A0G2JF94 121 aa6.66□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 SrarpQ3ULG3 163 aa6.66□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 1700074P13RikQ9D9G7 251 aa6.66□□□□□ -1.34
Pdgfra-201ENSMUST00000000476 Tns1E9Q0S6 1888 aaKnown RBP6.65□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 Pcnx3Q8VI59 2028 aa6.65□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 Gm3443F7CCV5 94 aa6.65□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 Cd164l2Q9D6W7 172 aa6.64□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 TeppQ6IMH0 216 aa6.64□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 Gm26566Q8CAC1 153 aa6.64□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 Igkv3-7A0A0G2JE31 119 aa6.64□□□□□ -1.35
Pdgfra-201ENSMUST00000000476 Ifitm6A0A1B0GS75 124 aa6.63□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 85.4 ms