RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 2010109I03RikQ9CQ11 111 aa7.11□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Sorl1O88307 2215 aaKnown RBP7.11□□□□□ -1.27
Scn8a-213ENSMUST00000201549 LhbO09108 141 aa7.11□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Trbv14A0A140T8L9 115 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Prrc2aQ7TSC1 2158 aaKnown RBP7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Ighv10-3A0A075B5T6 119 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Rasl10aQ8K5A4 203 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Ccl24Q9JKC0 119 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 BC107364E9Q5A2 140 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Dopey1Q8BL99 2399 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Foxi2Q3I5G5 311 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Wipf1Q8K1I7 493 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Gm21060J3KMU4 56 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Ccl25O35903 144 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Gp9O88186 177 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Atp5g1Q9CR84 136 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Wnk1P83741 2377 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 A130051J06RikQ8CAU1 227 aa7.1□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Gm5468Q8C3D3 155 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 1520401A03RikA0A0J9YVH6 598 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Cd27P41272 250 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 BtcQ05928 177 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Tm2d2Q8R0I4 213 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Gm17521F6QAC8 156 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Camk2n2Q78WH7 79 aa7.09□□□□□ -1.27
Scn8a-213ENSMUST00000201549 Col4a4Q9QZR9 1682 aa7.09□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ighv1-52A0A0A6YXC3 117 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm26602M0QWA4 95 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Tcl1b5P56845 121 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 UrahQ9CRB3 118 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Cspg4Q8VHY0 2327 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ndufb1P0DN34 57 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm10295Q8CCF3 114 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ighv10-1A0A0B4J1J6 119 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Map6d1Q14BB9 191 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm9887F6RFI0 207 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Prr15lQ8JZM2 100 aa7.08□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ighv1-64A0A075B5X3 117 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 P84750 121 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm9958Q8C9U4 106 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ighv1-50A0A075B5W1 117 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm8439G3UWA7 96 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Rpl39P62892 51 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Q9D131 166 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Iglc1A0A0G2JE99 106 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 P01843 105 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Apoc4Q61268 124 aa7.07□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm15217A2CG07 155 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Wfdc13Q5DQQ6 81 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Wisp2Q9Z0G4 251 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Atp6v0e2Q91XE7 81 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Atp5g3P56384 141 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm1968Q3T9I3 115 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 C920008G01RikA0A0B4J1N1 112 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 9130230L23RikQ8CC80 163 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ramp1Q9WTJ5 148 aa7.06□□□□□ -1.28
Scn8a-213ENSMUST00000201549 P0C913 63 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 BlcapP62951 87 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm28374F6SG70 93 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Fam19a5Q91WE9 132 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm10542F6XDR3 90 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Pglyrp1O88593 182 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ube2d3P61079 147 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Cyyr1Q8VIH7 165 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Cox7b2Q9D2H1 82 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Atox1O08997 68 aaKnown RBP7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 P01750 117 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Fam241bQ9D882 120 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Trav4n-4A0A075B615 110 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 P04944 107 aa7.05□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Trav11A0A0B4J1J9 114 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm42674D3YUT9 64 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 7420426K07RikQ3UX66 186 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Gm20499D3Z4G5 72 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 AW146154Q3TPQ7 468 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 P01837 106 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Lst1O08843 95 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Cox7cP17665 63 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Spry2Q9QXV8 315 aa7.04□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Rnf152Q8BG47 203 aa7.03□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ly6hQ9WUC3 139 aa7.03□□□□□ -1.28
Scn8a-213ENSMUST00000201549 E130114P18RikF6S0S7 154 aa7.03□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Ang4Q3TMQ6 144 aa7.03□□□□□ -1.28
Scn8a-213ENSMUST00000201549 5730596B20RikQ8BQ08 205 aa7.03□□□□□ -1.28
Scn8a-213ENSMUST00000201549 Cox7bP56393 80 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Gm6899Q3USS0 134 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Wdr38Q9D994 303 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 AcanQ61282 2132 aaKnown RBP7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Gm12689Q8BQU9 117 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 C2cd3Q52KB6 2323 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Csdc2Q91YQ3 154 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 1600014C23RikQ9DAX4 101 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Gm44965A0A0N4SVR3 59 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 AngP21570 145 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 EnhoQ8K1D8 76 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Ighv1-12A0A0A6YXJ9 117 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Smrp1Q2MH31 260 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 Shisa2Q8QZV2 295 aa7.02□□□□□ -1.29
Scn8a-213ENSMUST00000201549 A0A286YCN5 57 aa7.01□□□□□ -1.29
Scn8a-213ENSMUST00000201549 E030018B13RikJ3QMS9 113 aa7.01□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 153 ms