RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Igkv4-57-1A0A075B5M4 119 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ccdc179J3QM76 67 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm10192Q3V0S1 108 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Fam24aQ8CF27 98 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Spag11Q8K4N2 71 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-64A0A075B5X3 117 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv2-6-8A0A0A6YWY9 116 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-74A0A0G2JGK2 117 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Defa27F2Z403 93 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Rpl35aO55142 110 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Tmem254aP0DN89 123 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Tmem254bP0DN90 123 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Tmem254cP0DN91 123 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Fam110dQ80X91 271 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm10300Q8C8P7 189 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 1700010B08RikQ9DAI7 102 aa4.21□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Trav6-4A0A075B6B4 115 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Igkv4-70A0A0B4J1I5 116 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm9887F6RFI0 207 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Socs3O35718 225 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Odf1Q61999 247 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Defb29Q8BGW9 78 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Spink12Q9D256 87 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Trbv16A0A0B4J1H3 115 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Igkv1-35A0A0G2JDE5 120 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Trav13n-1A0A0G2JEU8 110 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Svs5P30933 122 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ang3P97802 145 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Nbl1Q61477 178 aa4.2□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm16381A0A1Y7VKT9 73 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Defa28D3Z1V9 94 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Pglyrp1O88593 182 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 P01750 117 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Acyp1P56376 99 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 BaalcQ8VHV1 145 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Q9CX25 107 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Lypd8Q9D7S0 255 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Wisp2Q9Z0G4 251 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm37389A0A0A6YW05 95 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Pet100P0DJE0 76 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Tm2d2Q8R0I4 213 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Lage3Q9CR70 148 aa4.19□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm884A2A9H6 3643 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 BikO70337 150 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-61P01749 117 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Tmem223Q9CQE2 199 aaKnown RBP4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 3110070M22RikQ9DAQ7 118 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Col6a4A2AX52 2309 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-50A0A075B5W1 117 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv5-9-1A0A0A6YVS4 126 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 LhbO09108 141 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Defb30Q30KN4 75 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ndufa12Q7TMF3 145 aaKnown RBP4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Hes7Q8BKT2 225 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Q9DAB9 146 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ndufs7Q9DC70 224 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 SnurfQ9WU12 71 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Notch3Q61982 2318 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv2-3A0A075B696 115 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm9513B3GLJ6 99 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 9130230L23RikQ8CC80 163 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 4930524J08RikQ9CUJ5 163 aa4.18□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv3-1A0A075B5S6 116 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Igkv4-57A0A0A6YYE7 117 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Pou2af1Q64693 256 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Pfn2Q9JJV2 140 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Sorl1O88307 2215 aaKnown RBP4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Dmxl2Q8BPN8 3032 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Trav9d-4A0A0G2JG37 103 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Krtap16-1A2A5X5 502 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Rbm3O89086 153 aaKnown RBP4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ccl3P10855 92 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ntn5Q3UQ22 452 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm9747Q810H1 104 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Znf414Q9DCK4 299 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Serp1Q9Z1W5 66 aa4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Prpf8Q99PV0 2335 aaKnown RBP4.17□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Gm11939A2A592 99 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Fhl2O70433 279 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 P01823 113 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Dph3Q8K0W9 82 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 4930535I16RikQ9CUI2 172 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-62-1A0A075B5U3 116 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-11A0A0A6YWI9 117 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 EnhoQ8K1D8 76 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 4930519P11RikQ9CUJ8 166 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 MplkipQ9D011 178 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Spg11Q3UHA3 2430 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Trdv5A0A075B661 115 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 H2al1bA0A087WP11 105 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ube2d4D3YUH6 135 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 H2al1kJ3QP08 105 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ighv1-72P01751 139 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Rpl28P41105 137 aaKnown RBP4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Cox6b1P56391 86 aaKnown RBP4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Sec61gP60060 68 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Rpl36aP83882 106 aaKnown RBP4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 H2al1eQ810S6 105 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 H2al1mQ9DAD9 105 aa4.16□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Znf580Q9DB38 172 aa4.16□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms