RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 RetnQ99P87 114 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Zc2hc1bQ9D534 172 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Rnase1P00683 149 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Egr2P08152 470 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ube2d1P61080 147 aaKnown RBP8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Hcfc1Q61191 2045 aaKnown RBP8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Trank1Q8BV79 2999 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm6793B2RXM2 351 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm20726G3UX18 150 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 GalmQ8K157 342 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ndufb4Q9CQC7 129 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Nop10Q9CQS2 64 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Q9D8Q6 235 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ndufs7Q9DC70 224 aa8.14□□□□□ -1.11
Msh3-201ENSMUST00000022220 Scgb1b2O35176 93 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Prh1P05142 261 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ucn2Q99ML8 113 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Spink12Q9D256 87 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Trav9d-3A0A075B695 113 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Tep1P97499 2629 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Tcte2E9PY37 120 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm5464Q3UY29 175 aa8.13□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ighv1-82A0A0G2JEU7 117 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ube2d3P61079 147 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ube2d2P62838 147 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Tmem213Q08EA8 116 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Akap9Q70FJ1 3797 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Nsd1O88491 2588 aaKnown RBP8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Dand5Q76LW6 185 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 4930415O20RikQ8CDT5 131 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm9195A0A140LHT4 2805 aa8.12□□□□□ -1.11
Msh3-201ENSMUST00000022220 Defa7P50705 93 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Obox8V9GWY9 217 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm20730A0A075B5J6 119 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm5629P06327 117 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 CirbpP60824 172 aaKnown RBP8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Rmi2Q3UPE3 149 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 A530064D06RikQ8BNV8 229 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Morn3Q8C5T4 241 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Mrpl35Q9CQL6 188 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 4930470P17RikQ9D542 155 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Chd6A3KFM7 2711 aa8.11□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ighv1-53A0A075B5W3 117 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gm10226O88253 85 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Atp5eP56382 52 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 P84751 237 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Fam216aQ9DB54 251 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Defa20Q45VN2 95 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Zzef1Q5SSH7 2924 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 P06328 117 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 TshbP12656 138 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Mpv17l2Q8VIK2 200 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Crip2Q9DCT8 208 aaKnown RBP8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Ighv2-3A0A075B696 115 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 BB014433Q8C5R5 389 aa8.1□□□□□ -1.11
Msh3-201ENSMUST00000022220 Igkv4-74A0A0B4J1I3 119 aa8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 Igkv4-71A0A0G2JEH0 117 aa8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 Gata1P17679 413 aa8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 AW146154Q3TPQ7 468 aa8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 CnfnQ6PCW6 111 aa8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 Prelid3aQ8VE85 172 aa8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 Utp20Q5XG71 2788 aaKnown RBP8.09□□□□□ -1.11
Msh3-201ENSMUST00000022220 1520401A03RikA0A0J9YVH6 598 aa8.09□□□□□ -1.12
Msh3-201ENSMUST00000022220 Prss58Q8BW11 241 aa8.09□□□□□ -1.12
Msh3-201ENSMUST00000022220 A130051J06RikQ8CAU1 227 aa8.09□□□□□ -1.12
Msh3-201ENSMUST00000022220 Q8R092 253 aa8.09□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm5878E9PUB3 99 aa8.08□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm10135F6TEE5 83 aa8.08□□□□□ -1.12
Msh3-201ENSMUST00000022220 Defa23Q5G866 93 aa8.08□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm20499D3Z4G5 72 aa8.08□□□□□ -1.12
Msh3-201ENSMUST00000022220 Rnf183Q8QZS5 190 aa8.08□□□□□ -1.12
Msh3-201ENSMUST00000022220 Igkv1-99F6XWB2 120 aa8.07□□□□□ -1.12
Msh3-201ENSMUST00000022220 LeprotO89013 131 aa8.07□□□□□ -1.12
Msh3-201ENSMUST00000022220 Chd9Q8BYH8 2885 aa8.07□□□□□ -1.12
Msh3-201ENSMUST00000022220 Ebi3O35228 228 aa8.07□□□□□ -1.12
Msh3-201ENSMUST00000022220 Defb45Q3V490 66 aa8.07□□□□□ -1.12
Msh3-201ENSMUST00000022220 LhbO09108 141 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Trav4d-3A0A075B625 110 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Igkv4-70A0A0B4J1I5 116 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 PrlhG3UWC3 86 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 C1qcQ02105 246 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 SbsponQ3UPR9 264 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Vmo1Q5SXG7 201 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Col6a5A6H584 2640 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm21748Q3UE70 102 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Fam19a4Q7TPG5 135 aa8.06□□□□□ -1.12
Msh3-201ENSMUST00000022220 Pglyrp4Q0VB07 374 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 Cox7a1P56392 80 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 Smr3aQ61900 147 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 Defa21Q8C1P2 93 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 1700056E22RikF7CNM6 234 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm9936Q8C864 160 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 Lyzl4Q9D925 145 aa8.05□□□□□ -1.12
Msh3-201ENSMUST00000022220 Zfp951A0A087WRH0 451 aa8.04□□□□□ -1.12
Msh3-201ENSMUST00000022220 Dnal4Q9DCM4 105 aa8.04□□□□□ -1.12
Msh3-201ENSMUST00000022220 Timm17aQ9Z0V8 171 aa8.04□□□□□ -1.12
Msh3-201ENSMUST00000022220 Glrp1E9Q9S8 174 aa8.04□□□□□ -1.12
Msh3-201ENSMUST00000022220 Odf1Q61999 247 aa8.04□□□□□ -1.12
Msh3-201ENSMUST00000022220 Dad1P61804 113 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 Prr9Q8BV84 116 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms