RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 P01659 112 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Spg11Q3UHA3 2430 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Znf239P24399 201 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 C1qcQ02105 246 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Brwd1Q921C3 2304 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Trav13d-1A0A075B606 110 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Igkv3-3A0A140T8Q0 119 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Wfdc10Q3V2J9 124 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Eml5Q8BQM8 1977 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Kif26aQ52KG5 1881 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 P06320 134 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Spry2Q9QXV8 315 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Eml6Q5SQM0 1958 aa6.92□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Ighv8-5A0A0A6YY60 119 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 E130114P18RikF6S0S7 154 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Trav13-1A0A075B644 110 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm20708H3BKF4 155 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Prp2P05143 317 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 SvipQ3UZP4 77 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 FshbQ60687 130 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Higd2aQ9CQJ1 106 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Znf706Q9D115 76 aaKnown RBP6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Igkv1-35A0A0G2JDE5 120 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Igkv3-4A0A140T8Q4 119 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 P01820 115 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 A830005F24RikQ8BRT5 167 aa6.91□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Gm10542F6XDR3 90 aa6.9□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Lmo4P61969 165 aa6.9□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Fam19a1Q7TPG8 133 aa6.9□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Cdpf1Q8R3A2 119 aa6.9□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 BaalcQ8VHV1 145 aa6.9□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 MylkQ6PDN3 1941 aaKnown RBP6.9□□□□□ -1.3
Ccdc47-201ENSMUST00000002043 Parp4E9PYK3 1969 aa6.9□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 P18527 97 aa6.9□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 A130051J06RikQ8CAU1 227 aa6.9□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Prr15lQ8JZM2 100 aa6.9□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Q9D131 166 aa6.9□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv1-66A0A075B5X5 117 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Trav13-4-dv7A0A075B6C2 110 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv2-3A0A075B696 115 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm44965A0A0N4SVR3 59 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 P01728 117 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 CnfnQ6PCW6 111 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Pcnx2Q5DU28 2122 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 CenpwQ3URR0 86 aa6.89□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 H2al1bA0A087WP11 105 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Defb12Q8K4N3 78 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Nlrc5C3VPR6 1915 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Prrc2aQ7TSC1 2158 aaKnown RBP6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Rnf152Q8BG47 203 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Adamts9E9PUN6 1931 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Col4a6B1AVK5 1691 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 MsmpB1AWI6 139 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ndufs5Q99LY9 106 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv1-63A0A075B5X2 117 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Cox7bP56393 80 aa6.88□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 FcorP0DJI6 106 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm9949Q8C9F4 104 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv3-3A0A0A6YWL2 116 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 PtprfA2A8L5 1898 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv8-12A0A0G2JDE1 119 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm19935A0A1B0GSF9 52 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 H2al1aQ5M8Q2 105 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 H2al1eQ810S6 105 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 5730596B20RikQ8BQ08 205 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Klk5Q9D140 293 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Q9DAQ5 155 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 B230359F08RikA0A0B4J1K3 109 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 A830031A19RikQ8BNT5 113 aa6.87□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Tcf20Q9EPQ8 1987 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv2-9-1A0A075B697 116 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv1-59A0A0A6YXE0 117 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm9805F6YK59 57 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 U90926O08546 118 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm10226O88253 85 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Plac8l1Q08EJ0 177 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ighv1-62-1A0A075B5U3 116 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Obox2E9PXV9 151 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm9913Q8BQQ2 135 aa6.86□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 PlaurP35456 327 aa6.85□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Prr14lE9Q7C4 1971 aa6.85□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm4707V9GXN5 68 aa6.85□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Gm10337F7DEP7 55 aa6.85□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Q9D8Q6 235 aa6.85□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Wdr38Q9D994 303 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Vwa8Q8CC88 1905 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Prh1P05142 261 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Col8a2P25318 699 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 EnhoQ8K1D8 76 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 P84750 121 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Polr2kQ63871 58 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Ypel4Q65Z93 127 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Serp1Q9Z1W5 66 aa6.84□□□□□ -1.31
Ccdc47-201ENSMUST00000002043 Wipf1Q8K1I7 493 aa6.83□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Tmem131O70472 1877 aa6.83□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Arid1bE9Q4N7 2244 aa6.83□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Gm12689Q8BQU9 117 aa6.83□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Rnf185Q91YT2 192 aa6.83□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 P01823 113 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 E130116L18RikQ8BMV6 101 aa6.82□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms