RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 Ccl21aP84444 133 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Ccl21bP86792 133 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Ccl21cP86793 133 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Atp5g3P56384 141 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Gm5941Q497P9 117 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Fam222aQ6PGH4 453 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Gm21994F6T2D2 329 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Spag11Q8K4N2 71 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Bles03Q8VD62 251 aa10.18□□□□□ -0.78
Ube3a-216ENSMUST00000202945 LrbaQ9ESE1 2856 aa10.17□□□□□ -0.78
Ube3a-216ENSMUST00000202945 GalmQ8K157 342 aa10.17□□□□□ -0.78
Ube3a-216ENSMUST00000202945 MtorQ9JLN9 2549 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Ccl19O70460 108 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Gm904Q3V2L5 102 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Olfr313Q5NC55 308 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Mfap4Q9D1H9 257 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Wdr38Q9D994 303 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Higd1aQ9JLR9 95 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Gm33815A0A087WNV3 176 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Igkv4-59A0A0B4J1I8 117 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Trbv17A0A140T8P8 114 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Ighv8-12A0A0G2JDE1 119 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Igkv20-101-2A0A0G2JDU3 113 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Mrps12O35680 139 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Phpt1Q9DAK9 124 aa10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Ankrd17Q99NH0 2603 aaKnown RBP10.16□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Igkv4-57-1A0A075B5M4 119 aa10.15□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Sprr3O09116 238 aa10.15□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Rpl32-psP17932 135 aa10.15□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Lgals4Q8K419 326 aa10.15□□□□□ -0.78
Ube3a-216ENSMUST00000202945 3110018I06RikQ9CXS0 120 aa10.15□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Chd9Q8BYH8 2885 aa10.15□□□□□ -0.78
Ube3a-216ENSMUST00000202945 Gata1P17679 413 aa10.15□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm16223Q8CBM3 117 aa10.15□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Trav6-4A0A075B6B4 115 aa10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm10553J3QPF1 123 aa10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 PmvkQ9D1G2 192 aa10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 HampQ9EQ21 83 aa10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 FlnaQ8BTM8 2647 aaKnown RBP10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 A130051J06RikQ8CAU1 227 aa10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Tmem101Q91VP7 257 aa10.14□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Rpl36-ps4A0A140T8U4 117 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Rmi2Q3UPE3 149 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 4930415O20RikQ8CDT5 131 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 P01837 106 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Tex26Q0VB26 296 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Ndufa4Q62425 82 aaKnown RBP10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Iah1Q9DB29 249 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Dpm3Q9D1Q4 92 aa10.13□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Usmg5Q78IK2 58 aa10.12□□□□□ -0.79
Ube3a-216ENSMUST00000202945 BC048562Q80ZQ7 204 aa10.12□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm4861Q8C5A4 106 aa10.12□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Fam216aQ9DB54 251 aa10.12□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Socs3O35718 225 aa10.12□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Fhl1P97447 280 aaKnown RBP10.12□□□□□ -0.79
Ube3a-216ENSMUST00000202945 AW146154Q3TPQ7 468 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Rnf185Q91YT2 192 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm29666A0A087WQ99 126 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Tcte2E9PY37 120 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm2564F6Z9S8 108 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Prp2P05143 317 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Obox8V9GWY9 217 aa10.11□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Hist1h4aP62806 103 aaKnown RBP10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Il1f10Q8R459 152 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Ighv1-53A0A075B5W3 117 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Ighv1-9A0A0A6YW37 117 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 ColqO35348 457 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Defa20Q45VN2 95 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Unc79Q0KK59 2596 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Chd6A3KFM7 2711 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Myo18bE9PV66 2605 aa10.1□□□□□ -0.79
Ube3a-216ENSMUST00000202945 4930447F04RikA2AFR2 126 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm6793B2RXM2 351 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Olfr311Q5NC59 308 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Rnf183Q8QZS5 190 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Cyyr1Q8VIH7 165 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Smim1P0C8K7 78 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 SrarpQ3ULG3 163 aa10.09□□□□□ -0.79
Ube3a-216ENSMUST00000202945 Gm7849D3YX03 116 aa10.08□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Scgb1b2O35176 93 aa10.08□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm10226O88253 85 aa10.08□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Prss58Q8BW11 241 aa10.08□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Crip2Q9DCT8 208 aaKnown RBP10.08□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Spry2Q9QXV8 315 aa10.08□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Mast4Q811L6 2618 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm7102J3QQ10 178 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gatd1Q8BFQ8 220 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Atp6v0e2Q91XE7 81 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Snai3Q9QY31 287 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Shisa9Q9CZN4 424 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Trav13d-1A0A075B606 110 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Ighv8-5A0A0A6YY60 119 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 OdaphJ3QNT8 126 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Morn5Q9DAI9 170 aa10.07□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Col7a1Q63870 2944 aa10.06□□□□□ -0.8
Ube3a-216ENSMUST00000202945 A530064D06RikQ8BNV8 229 aa10.06□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Igkv6-13A0A0G2JGY3 119 aa10.06□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm3618D3Z4P5 127 aa10.06□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm2916Q9D9B9 127 aa10.06□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Pdzd2E9Q1M1 2796 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms