RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Ighv1-5A0A0A6YWG2 117 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm45717A0A1B0GT68 152 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ccl25O35903 144 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 P01812 117 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Olfr313Q5NC55 308 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm10295Q8CCF3 114 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Crip2Q9DCT8 208 aaKnown RBP4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Dkk2Q9QYZ8 259 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Trav6-4A0A075B6B4 115 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Fhl1P97447 280 aaKnown RBP4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 1500011B03RikQ3TTH7 73 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ifitm1Q9D103 106 aa4.68□□□□□ -1.66
Lig4-202ENSMUST00000170033 Igkv4-62A0A0G2JDW9 117 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 P01750 117 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm5629P06327 117 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 BC025920Q3US60 128 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm5105Q8C6Y9 112 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Wfdc15bQ9JHY4 80 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv1-50A0A075B5W1 117 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Igkv20-101-2A0A0G2JDU3 113 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm7849D3YX03 116 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Krtap27-1E9PX37 202 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 P01747 120 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Lyrm9Q3UN90 78 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm10837Q3UTT8 145 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Cfap126Q6P8X9 189 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Atp6v0e2Q91XE7 81 aa4.67□□□□□ -1.66
Lig4-202ENSMUST00000170033 Prrc2aQ7TSC1 2158 aaKnown RBP4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Smim1P0C8K7 78 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Cox17P56394 63 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 CenpwQ3URR0 86 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Q4KKZ1 196 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 4930564D02RikQ9D4S4 103 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Rbmxl2Q9DAE2 385 aaKnown RBP4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 H2al1bA0A087WP11 105 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 H2al1kJ3QP08 105 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 P01837 106 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 P18527 97 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Spint3Q3UW09 88 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Polr2kQ63871 58 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Olfr312Q7TRZ9 308 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 H2al1eQ810S6 105 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 9430069I07RikQ9CX21 111 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 H2al1mQ9DAD9 105 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Lce6aD3YV94 81 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm9925F6T2U3 160 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 S100a4P07091 101 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Eif4ebp1Q60876 117 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 TeppQ6IMH0 216 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Mrpl36Q99N90 102 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Timm17aQ9Z0V8 171 aa4.66□□□□□ -1.66
Lig4-202ENSMUST00000170033 Map1aQ9QYR6 2776 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv1-85A0A075B5Y6 117 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv5-9-1A0A0A6YVS4 126 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 6430550D23RikE9Q1X6 194 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm10135F6TEE5 83 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 TshbP12656 138 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ndufb4Q9CQC7 129 aa4.65□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm44965A0A0N4SVR3 59 aa4.65□□□□□ -1.67
Lig4-202ENSMUST00000170033 Vpreb1P13372 142 aa4.65□□□□□ -1.67
Lig4-202ENSMUST00000170033 Rpl11Q9CXW4 178 aaKnown RBP4.65□□□□□ -1.67
Lig4-202ENSMUST00000170033 Spry2Q9QXV8 315 aa4.65□□□□□ -1.67
Lig4-202ENSMUST00000170033 Myo15bI7HPW8 3033 aa4.65□□□□□ -1.67
Lig4-202ENSMUST00000170033 SetxA2AKX3 2646 aa4.65□□□□□ -1.67
Lig4-202ENSMUST00000170033 Sptbn2Q68FG2 2388 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Vps13cQ8BX70 3748 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Snrpd3P62320 126 aaKnown RBP4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Prok1Q14A28 105 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Tac4Q99N14 128 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Sertad4A7DTG3 377 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gm11444F6QMA6 170 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Pglyrp1O88593 182 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Hbb-b2P02089 147 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Cep250Q60952 2414 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Arhgap32Q811P8 2089 aa4.64□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ighv2-6-8A0A0A6YWY9 116 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gm17732E9Q5I2 61 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Atp5g3P56384 141 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Tmem213Q08EA8 116 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Fgfbp3Q1HCM0 245 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gm12888Q3UW77 119 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Prss58Q8BW11 241 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Klk15Q8CGR4 254 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Lyzl4Q9D925 145 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ighv1-12A0A0A6YXJ9 117 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Tmem243B2RVB9 118 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gm11011D3Z3L9 86 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 P01794 123 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Cela2aP05208 271 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Defb45Q3V490 66 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ang5Q5GAN1 145 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 NpbQ8K4P1 119 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Tm2d2Q8R0I4 213 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 4930442H23RikQ9D5G7 103 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gm10271F6WY25 52 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 P01643 108 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Lynx1P0DP60 116 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gphb5Q812B2 130 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Srsf12Q8C8K3 266 aa4.63□□□□□ -1.67
Lig4-202ENSMUST00000170033 Cnot1Q6ZQ08 2375 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms