RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Smim13E9Q942 88 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Vsig4F6TUL9 280 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Defa13P50711 93 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Defb42Q8BVB5 75 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm9922Q8C3P1 144 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Il19Q8CJ70 176 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Josd1Q9DBJ6 202 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Egr2P08152 470 aa10.73□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gng4P50153 75 aa10.73□□□□□ -0.69
Nup88-202ENSMUST00000108530 Umad1E0CX23 159 aa10.73□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm17430F6RSK3 157 aa10.73□□□□□ -0.69
Nup88-202ENSMUST00000108530 Vmn1r197Q8R265 298 aa10.72□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gnb1lQ9EQ15 326 aa10.72□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm28044L7N1X0 119 aa10.72□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm5629P06327 117 aa10.72□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm10604Q3V0X7 143 aa10.72□□□□□ -0.69
Nup88-202ENSMUST00000108530 Nhlrc1Q8BR37 401 aa10.72□□□□□ -0.69
Nup88-202ENSMUST00000108530 Krtap16-1A2A5X5 502 aa10.71□□□□□ -0.69
Nup88-202ENSMUST00000108530 TcraP01849 138 aa10.71□□□□□ -0.69
Nup88-202ENSMUST00000108530 Q9D8Q6 235 aa10.71□□□□□ -0.69
Nup88-202ENSMUST00000108530 Tmem263Q9DAM7 115 aa10.71□□□□□ -0.69
Nup88-202ENSMUST00000108530 A730046J19RikA0A1B0GSN8 89 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Krtap27-1E9PX37 202 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 P01794 123 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Polr2kQ63871 58 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Tnfrsf23Q9ER63 176 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 PlnP61014 52 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Lyrm9Q3UN90 78 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Snx22Q8C084 192 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Col6a5A6H584 2640 aa10.7□□□□□ -0.7
Nup88-202ENSMUST00000108530 Tmem238lA0A1B0GS74 79 aa10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 Rpl39P62892 51 aa10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 CtrlQ9ER05 264 aa10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 Bsph2Q0Q236 131 aa10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 Ormdl2Q9CQZ0 153 aa10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 Sec11aQ9R0P6 179 aa10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 Slc25a20Q9Z2Z6 301 aaKnown RBP10.69□□□□□ -0.7
Nup88-202ENSMUST00000108530 Mtatp8P03930 67 aa10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 A530064D06RikQ8BNV8 229 aa10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 PolqQ8CGS6 2544 aa10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 Esp3J3QN49 87 aa10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 Gm10509O88255 85 aa10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 Lyzl4Q9D925 145 aa10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 Crip2Q9DCT8 208 aaKnown RBP10.68□□□□□ -0.7
Nup88-202ENSMUST00000108530 Pxt1Q8K459 51 aa10.67□□□□□ -0.7
Nup88-202ENSMUST00000108530 Trav7d-3Q5R1I1 112 aa10.67□□□□□ -0.7
Nup88-202ENSMUST00000108530 Q99M08 65 aa10.67□□□□□ -0.7
Nup88-202ENSMUST00000108530 Hspb8Q9JK92 196 aa10.67□□□□□ -0.7
Nup88-202ENSMUST00000108530 Notch2O35516 2470 aa10.66□□□□□ -0.7
Nup88-202ENSMUST00000108530 Trdv5A0A075B661 115 aa10.66□□□□□ -0.7
Nup88-202ENSMUST00000108530 OdaphJ3QNT8 126 aa10.66□□□□□ -0.7
Nup88-202ENSMUST00000108530 Lgals6O54891 301 aa10.66□□□□□ -0.7
Nup88-202ENSMUST00000108530 Nop10Q9CQS2 64 aa10.66□□□□□ -0.7
Nup88-202ENSMUST00000108530 AamdcQ8R0P4 122 aa10.66□□□□□ -0.7
Nup88-202ENSMUST00000108530 Tmem97Q8VD00 176 aa10.65□□□□□ -0.7
Nup88-202ENSMUST00000108530 P18527 97 aa10.65□□□□□ -0.71
Nup88-202ENSMUST00000108530 Erg28Q9ERY9 140 aa10.65□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gpx1P11352 201 aa10.64□□□□□ -0.71
Nup88-202ENSMUST00000108530 Ndufc2Q9CQ54 120 aa10.64□□□□□ -0.71
Nup88-202ENSMUST00000108530 CrygfQ9CXV3 174 aa10.64□□□□□ -0.71
Nup88-202ENSMUST00000108530 Srrm2Q8BTI8 2703 aaKnown RBP10.64□□□□□ -0.71
Nup88-202ENSMUST00000108530 Ighv1-85A0A075B5Y6 117 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 P84751 237 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm29289A0A087WPY7 166 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm4064A0A087WR82 380 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm10352B2RWR6 380 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm21693J3QK27 380 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Rbmy1a1O35698 380 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 P06329 120 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Cby1Q9D1C2 127 aa10.63□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm12057A0A087WR21 115 aa10.62□□□□□ -0.71
Nup88-202ENSMUST00000108530 Fgf6P21658 208 aa10.62□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gata3P23772 443 aa10.62□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm26920S4R2A5 56 aa10.62□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm9242J3QNY1 357 aa10.61□□□□□ -0.71
Nup88-202ENSMUST00000108530 Rpl32P62911 135 aaKnown RBP10.61□□□□□ -0.71
Nup88-202ENSMUST00000108530 Ss18Q62280 418 aa10.61□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm26602M0QWA4 95 aa10.61□□□□□ -0.71
Nup88-202ENSMUST00000108530 Tmem170bP86050 132 aa10.61□□□□□ -0.71
Nup88-202ENSMUST00000108530 Q9D727 114 aa10.61□□□□□ -0.71
Nup88-202ENSMUST00000108530 Igkv4-91A0A075B5L2 119 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Rpl36-ps4A0A140T8U4 117 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm7257D3YX25 99 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm10322F7D7I4 111 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 F11rO88792 300 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Cysltr1Q99JA4 352 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm7138L7N2C3 230 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 4930596D02RikQ3V0H9 216 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm14137Q8CE97 175 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Ociad2Q9D8W7 154 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm3238W4VSP7 230 aa10.6□□□□□ -0.71
Nup88-202ENSMUST00000108530 Igkv2-137A0A0B4J1H6 120 aa10.59□□□□□ -0.71
Nup88-202ENSMUST00000108530 TtrP07309 147 aa10.59□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gata1P17679 413 aa10.59□□□□□ -0.71
Nup88-202ENSMUST00000108530 Gm9513B3GLJ6 99 aa10.59□□□□□ -0.71
Nup88-202ENSMUST00000108530 FcorP0DJI6 106 aa10.59□□□□□ -0.71
Nup88-202ENSMUST00000108530 ApcQ61315 2845 aa10.58□□□□□ -0.72
Nup88-202ENSMUST00000108530 Fxyd5P97808 178 aa10.58□□□□□ -0.72
Nup88-202ENSMUST00000108530 CrygdP04342 174 aa10.58□□□□□ -0.72
Nup88-202ENSMUST00000108530 CrygeQ03740 174 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms