RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ighv2-6-8A0A0A6YWY9 116 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Igkv6-15A0A140T8M5 115 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 B230307C23RikQ8BLB2 64 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 FrylF8VQ05 3007 aa7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-64A0A075B5X3 117 aa7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-61P01749 117 aa7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 CnbpP53996 178 aaKnown RBP7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 1700010B08RikQ9DAI7 102 aa7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Bub3Q9WVA3 326 aa7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Dchs1E9PVD3 3291 aa7.17□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Defa-rs2P17534 91 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Tnrc18Q80WC3 2878 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv3-3A0A0A6YWL2 116 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Pet100P0DJE0 76 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Smim26Q3V460 107 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Prelid3aQ8VE85 172 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Pfn2Q9JJV2 140 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 VcanQ62059 3357 aa7.16□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 SelenowP63300 88 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Fam19a1Q7TPG8 133 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 A130051J06RikQ8CAU1 227 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ifitm1Q9D103 106 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-50A0A075B5W1 117 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-85A0A075B5Y6 117 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Cnep1r1Q3UJ81 125 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Gphb5Q812B2 130 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 A730015C16RikQ8C992 119 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 4930524J08RikQ9CUJ5 163 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Cd164Q9R0L9 197 aa7.15□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 CadB2RQC6 2225 aa7.15□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 TrioQ0KL02 3102 aa7.15□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Igkv4-74A0A0B4J1I3 119 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 B230217C12RikE9Q3Z1 139 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Cox6b1P56391 86 aaKnown RBP7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Higd1cQ76I25 96 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm26566Q8CAC1 153 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ndufa11Q9D8B4 141 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 3110070M22RikQ9DAQ7 118 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Slc25a15Q9WVD5 301 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm884A2A9H6 3643 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Myo15aQ9QZZ4 3511 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Igkv4-90A0A075B5L3 117 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ighv1-58A0A075B5W9 117 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ighv1-74A0A0G2JGK2 117 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm15217A2CG07 155 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 P01750 117 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ly6lH3BJG9 140 aa7.14□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Akap9Q70FJ1 3797 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm20730A0A075B5J6 119 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Igkv6-13A0A0G2JGY3 119 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 CirbpP60824 172 aaKnown RBP7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm10645Q3UPY1 145 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Fam19a4Q7TPG5 135 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 A930002H24RikQ8C8Y3 163 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Dkk4Q8VEJ3 221 aa7.13□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ighv5-8A0A075B676 92 aa7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Igkv4-70A0A0B4J1I5 116 aa7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm5153P01627 120 aa7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 SpenQ62504 3644 aaKnown RBP7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm11020F6ZGD5 61 aa7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Q9DAB9 146 aa7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Abca1P41233 2261 aa7.12□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Trbv16A0A0B4J1H3 115 aa7.11□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 4930546C10RikE9Q4Y3 121 aa7.11□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm21994F6T2D2 329 aa7.11□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ighv1-62-3P01754 117 aa7.11□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Rpl11Q9CXW4 178 aaKnown RBP7.11□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Odf1Q61999 247 aa7.11□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 E130218I03RikA0A0U1RNU5 63 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 E030018B13RikJ3QMS9 113 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ang3P97802 145 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Defb46Q4QY34 57 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Rps21Q9CQR2 83 aaKnown RBP7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Defa28D3Z1V9 94 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Ndufc1Q9CQY9 76 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Celsr1O35161 3034 aa7.1□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 P18532 116 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm10549Q3URY4 149 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 4930535I16RikQ9CUI2 172 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm11011D3Z3L9 86 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 BikO70337 150 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Vpreb2P13373 142 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm10577Q3UDV9 132 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm9747Q810H1 104 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm10308Q9CVR5 141 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Flg2Q2VIS4 2362 aa7.09□□□□□ -1.27
Hmgb1-201ENSMUST00000085546 Gm17732E9Q5I2 61 aa7.09□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Gm9925F6T2U3 160 aa7.09□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Lst1O08843 95 aa7.09□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Rbm3O89086 153 aaKnown RBP7.09□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 P06328 117 aa7.09□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Fgf23Q9EPC2 251 aa7.09□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Defa27F2Z403 93 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ccl6P27784 116 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Sostdc1Q9CQN4 206 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ighv1-82A0A0G2JEU7 117 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 P01747 120 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Prop1P97458 223 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 UqcrqQ9CQ69 82 aa7.08□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Celsr3Q91ZI0 3301 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms