RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 TectaO08523 2155 aa7.56□□□□□ -1.2
Syne1-201ENSMUST00000041639 Map6d1Q14BB9 191 aa7.56□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm10251J3QPM5 127 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm2916Q9D9B9 127 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm17472A0A075B683 117 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm4861Q8C5A4 106 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 9130230L23RikQ8CC80 163 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Tax1bp3Q9DBG9 124 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm26602M0QWA4 95 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 1810032O08RikE9PZV8 113 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Zc2hc1bQ9D534 172 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Pglyrp1O88593 182 aa7.55□□□□□ -1.2
Syne1-201ENSMUST00000041639 Ighv1-53A0A075B5W3 117 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Igkv1-88A0A140T8N1 120 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 P01748 117 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Igkv8-26A0A075B5N5 123 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Atp5g1Q9CR84 136 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm10542F6XDR3 90 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 A230072I06RikQ3UUJ8 172 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm10295Q8CCF3 114 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Fhl1P97447 280 aaKnown RBP7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Tm2d2Q8R0I4 213 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gata3P23772 443 aa7.54□□□□□ -1.2
Syne1-201ENSMUST00000041639 Trav13n-2A0A0G2JF93 110 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Pla2g2aP31482 146 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Gm9913Q8BQQ2 135 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Igkv2-109A0A075B5K6 120 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Klk12B2RVZ0 247 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Tmem258P61166 79 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 P84751 237 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Nup210Q9QY81 1886 aaKnown RBP7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Ighv3-1A0A075B5S6 116 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Trav13-1A0A075B644 110 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 E030018B13RikJ3QMS9 113 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Defb12Q8K4N3 78 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Brk1Q91VR8 75 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Q9D131 166 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Spata25Q9DA57 226 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Trav4d-3A0A075B625 110 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Igkv1-35A0A0G2JDE5 120 aa7.53□□□□□ -1.2
Syne1-201ENSMUST00000041639 Trav13-4-dv7A0A075B6C2 110 aa7.52□□□□□ -1.2
Syne1-201ENSMUST00000041639 B230359F08RikA0A0B4J1K3 109 aa7.52□□□□□ -1.2
Syne1-201ENSMUST00000041639 Trbv16A0A0B4J1H3 115 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Odf3l1Q810P2 275 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 P01674 108 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 P0C913 63 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 AngP21570 145 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Spink8Q09TK9 105 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Ighv12-3A0A075B5T1 117 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Gm21060J3KMU4 56 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Defb18Q30KP5 85 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Zmat4Q8BZ94 229 aa7.52□□□□□ -1.21
Syne1-201ENSMUST00000041639 Gm44965A0A0N4SVR3 59 aa7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 Trav11A0A0B4J1J9 114 aa7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 Klk5Q9D140 293 aa7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 AW146154Q3TPQ7 468 aa7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 Atp5g3P56384 141 aa7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 Gm9958Q8C9U4 106 aa7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 Nsun4C4P6S0 806 aaKnown RBP7.51□□□□□ -1.21
Syne1-201ENSMUST00000041639 Col24a1Q30D77 1733 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 NrgnP60761 78 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 Obox8V9GWY9 217 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 BC107364E9Q5A2 140 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 P01728 117 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 Zfand3Q497H0 227 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 P06328 117 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 Col4a6B1AVK5 1691 aa7.5□□□□□ -1.21
Syne1-201ENSMUST00000041639 CrygdP04342 174 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Camk2n2Q78WH7 79 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 4930470P17RikQ9D542 155 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 AvpP35455 168 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Ndufa4l2Q4FZG9 87 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Mrpl52Q9D0Y8 121 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Abca2P41234 2434 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Sh2d1aO88890 126 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 P01745 121 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Ramp1Q9WTJ5 148 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Trav4-3A0A0B4J1K1 110 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 P01747 120 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Gm5468Q8C3D3 155 aa7.49□□□□□ -1.21
Syne1-201ENSMUST00000041639 Cox7b2Q9D2H1 82 aa7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 Triap1Q9D8Z2 76 aa7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 Tet2Q4JK59 1912 aaKnown RBP7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 PtprqP0C5E4 2300 aa7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 Higd2aQ9CQJ1 106 aa7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 BikO70337 150 aa7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 Fgf6P21658 208 aa7.48□□□□□ -1.21
Syne1-201ENSMUST00000041639 Snai3Q9QY31 287 aa7.47□□□□□ -1.21
Syne1-201ENSMUST00000041639 Gm3618D3Z4P5 127 aa7.47□□□□□ -1.21
Syne1-201ENSMUST00000041639 1700010B08RikQ9DAI7 102 aa7.47□□□□□ -1.21
Syne1-201ENSMUST00000041639 Reg3bP35230 175 aa7.47□□□□□ -1.21
Syne1-201ENSMUST00000041639 Ebi3O35228 228 aa7.46□□□□□ -1.21
Syne1-201ENSMUST00000041639 P01659 112 aa7.46□□□□□ -1.21
Syne1-201ENSMUST00000041639 Flg2Q2VIS4 2362 aa7.46□□□□□ -1.21
Syne1-201ENSMUST00000041639 Ighv2-6A0A075B6A7 116 aa7.46□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ighv1-11A0A0A6YWI9 117 aa7.46□□□□□ -1.22
Syne1-201ENSMUST00000041639 Igkv8-18A0A0B4J1J3 123 aa7.46□□□□□ -1.22
Syne1-201ENSMUST00000041639 Gm17577J3QNF7 156 aa7.46□□□□□ -1.22
Syne1-201ENSMUST00000041639 Spink4O35679 86 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 Myo9aQ8C170 2542 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 131.2 ms