RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Trav7-2Q5R1I3 112 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Odf1Q61999 247 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Mapk1ip1lQ8BH93 242 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 SelenokQ9JLJ1 94 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm11565A2A4M7 156 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 PolP10400 120 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Mpv17l2Q8VIK2 200 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 4930442H23RikQ9D5G7 103 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Rnase1P00683 149 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Egr2P08152 470 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ucn2Q99ML8 113 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gemin7Q9CWY4 129 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ndufa1O35683 70 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 GhrhP16043 103 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Q99M08 65 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm28269A0A087WSG3 125 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Igkv4-74A0A0B4J1I3 119 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 TshbP12656 138 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Bri3P28662 125 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Rev3lQ61493 3122 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 CtrlQ9ER05 264 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ube2bP63147 152 aa6.36□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 AcanQ61282 2132 aaKnown RBP6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Cox7cP17665 63 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Foxi1Q922I5 372 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Klk11Q9QYN3 276 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Prpf8Q99PV0 2335 aaKnown RBP6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 SonQ9QX47 2444 aaKnown RBP6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm17359A0A0G2JEB7 487 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 P01837 106 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm9513B3GLJ6 99 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 GfyJ3KML8 504 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 ColqO35348 457 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 P01747 120 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Runx1Q03347 451 aa6.35□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm45213A0A0U1RNZ6 101 aa6.34□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gatd1Q8BFQ8 220 aa6.34□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 MplkipQ9D011 178 aa6.34□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 4930564D02RikQ9D4S4 103 aa6.34□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Pfn2Q9JJV2 140 aa6.34□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm5629P06327 117 aa6.34□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm10295Q8CCF3 114 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ighv1-85A0A075B5Y6 117 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 LhbO09108 141 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Tmem263Q9DAM7 115 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Znf740Q6NZQ6 180 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ndufa3Q9CQ91 84 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm8439G3UWA7 96 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Trav3-4A0A075B654 114 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Pglyrp1O88593 182 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Morn5Q9DAI9 170 aa6.33□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Insl3O09107 122 aa6.32□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Fhl2O70433 279 aa6.32□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Pcp4P63054 62 aa6.32□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Fxyd5P97808 178 aa6.32□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Eif4ebp1Q60876 117 aa6.32□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Krtap26-1Q9D7N2 215 aa6.32□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Mtatp8P03930 67 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Foxc1Q61572 553 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Fam222aQ6PGH4 453 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 B230307C23RikQ8BLB2 64 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm4861Q8C5A4 106 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Spink10Q8CAC8 162 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ttc28Q80XJ3 2450 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Spag11Q8K4N2 71 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Fgfbp3Q1HCM0 245 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm14137Q8CE97 175 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Pkd1l2Q7TN88 2461 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ppp1r32Q148A4 427 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Nav2E9Q842 2432 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Igkv2-137A0A0B4J1H6 120 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Trbv13-1A0A0B4J1P8 112 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ccl25O35903 144 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Polr2kQ63871 58 aa6.31□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Rpl39P62892 51 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 A530064D06RikQ8BNV8 229 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Srsf12Q8C8K3 266 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Med13lQ6JPI3 2207 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ighv13-2A0A0A6YWN3 119 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm7257D3YX25 99 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Cd33Q63994 403 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Igkv8-26A0A075B5N5 123 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 PemtQ61907 199 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Defa21Q8C1P2 93 aa6.3□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Lrrk2Q5S006 2527 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 A930009A15RikG3UYI6 118 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Foxi2Q3I5G5 311 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 PpdpfQ9CR37 115 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 1520401A03RikA0A0J9YVH6 598 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gata3P23772 443 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 4930470P17RikQ9D542 155 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 C1qcQ02105 246 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Sptbn4E9PX29 2561 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Fgf6P21658 208 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Cyyr1Q8VIH7 165 aa6.29□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Ighv1-11A0A0A6YWI9 117 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Trav4-3A0A0B4J1K1 110 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Trav9d-4A0A0G2JG37 103 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Krtap27-1E9PX37 202 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Igkv8-18A0A0B4J1J3 123 aa6.28□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms