RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 TtrP07309 147 aa13.78□□□□□ -0.2
Shkbp1-201ENSMUST00000003857 Mpv17l2Q8VIK2 200 aa13.77□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Gm29666A0A087WQ99 126 aa13.76□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Ccl24Q9JKC0 119 aa13.76□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 OtogO55225 2910 aa13.76□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Defb18Q30KP5 85 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Trav3-1Q5R1I8 114 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Atp6v0e2Q91XE7 81 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Mrpl35Q9CQL6 188 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Muc4Q8JZM8 3443 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Tcrg-C1A0A075B5Z0 172 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 GalmQ8K157 342 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Ube2e2Q91W82 201 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Synj2bpQ9D6K5 145 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Tmem263Q9DAM7 115 aa13.75□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Gm10490F6VBM2 120 aa13.74□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Fam19a4Q7TPG5 135 aa13.74□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Il1f10Q8R459 152 aa13.74□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Ifitm1Q9D103 106 aa13.74□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Ep300B2RWS6 2412 aa13.74□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 C920008G01RikA0A0B4J1N1 112 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Insl3O09107 122 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Fhl2O70433 279 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Runx1Q03347 451 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Samd5Q3V1H9 173 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Ndufs7Q9DC70 224 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Utp20Q5XG71 2788 aaKnown RBP13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Psmb8P28063 276 aa13.73□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 CckP09240 115 aa13.72□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 OdaphJ3QNT8 126 aa13.72□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 A530064D06RikQ8BNV8 229 aa13.72□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 HampQ9EQ21 83 aa13.72□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 NbasE9Q411 2356 aa13.72□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Ighv2-6-8A0A0A6YWY9 116 aa13.71□□□□□ -0.21
Shkbp1-201ENSMUST00000003857 Igkv4-68A0A0B4J1I7 117 aa13.71□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 NpwA0A1L1STR8 176 aa13.71□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gm21748Q3UE70 102 aa13.71□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Klhdc1Q80YG3 406 aa13.71□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Morn5Q9DAI9 170 aa13.71□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gm35549A0A0N4SUS7 141 aa13.7□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 B230217C12RikE9Q3Z1 139 aa13.7□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 P01811 117 aa13.7□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Srsf12Q8C8K3 266 aa13.7□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 AY761184Q9D848 116 aa13.7□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gm933J3QPC1 141 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Lect2O88803 151 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gm28269A0A087WSG3 125 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gm10509O88255 85 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 BC048562Q80ZQ7 204 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 BC106179Q8C9L1 186 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Mfap4Q9D1H9 257 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Rab37Q9JKM7 223 aa13.69□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Cfap126Q6P8X9 189 aa13.68□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Atp5lQ9CPQ8 103 aa13.68□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 3110070M22RikQ9DAQ7 118 aa13.68□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Reg3gO09049 174 aa13.67□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Esp24A8R0V6 68 aa13.67□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 AngP21570 145 aa13.66□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Cox17P56394 63 aa13.66□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Ifitm10Q8BR26 201 aa13.66□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Ly86O88188 162 aa13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gata1P17679 413 aa13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Cdip1Q9DB75 208 aa13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Chd8Q09XV5 2582 aaKnown RBP13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gcn1E9PVA8 2671 aaKnown RBP13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Gm45785A0A1B0GT05 94 aa13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Ang3P97802 145 aa13.65□□□□□ -0.22
Shkbp1-201ENSMUST00000003857 Fgfbp3Q1HCM0 245 aa13.64□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Tnfrsf23Q9ER63 176 aa13.64□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Phlda3Q9WV95 125 aa13.64□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Rpl13aP19253 203 aaKnown RBP13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 March3Q8BRX9 218 aa13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Klk1b4P00757 256 aa13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 P84751 237 aa13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Gatd1Q8BFQ8 220 aa13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Ifi27l2aQ8R412 90 aa13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Ucn2Q99ML8 113 aa13.63□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 FlncQ8VHX6 2726 aaKnown RBP13.62□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Celsr2Q9R0M0 2920 aa13.62□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Trbv30A0A0B4J1P1 111 aa13.62□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Gm6793B2RXM2 351 aa13.62□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Ly6gP35461 111 aa13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Rpl32-psP17932 135 aa13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Cfc1P97766 202 aa13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Gm9913Q8BQQ2 135 aa13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 4930470P17RikQ9D542 155 aa13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Crip2Q9DCT8 208 aaKnown RBP13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Nbeal1E9PYP2 2688 aa13.61□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Gm9887F6RFI0 207 aa13.6□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Trav7d-3Q5R1I1 112 aa13.6□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Ighv1-11A0A0A6YWI9 117 aa13.6□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Cryba4Q9JJV0 196 aa13.59□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Fam110dQ80X91 271 aa13.59□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Spata45Q9CVW4 97 aa13.59□□□□□ -0.23
Shkbp1-201ENSMUST00000003857 Ighv1-72P01751 139 aa13.58□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 P01786 117 aa13.58□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Rbmy1bQ60990 380 aa13.58□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Ptpn13Q64512 2453 aa13.58□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Gm10322F7D7I4 111 aa13.58□□□□□ -0.24
Shkbp1-201ENSMUST00000003857 Akap6E9Q9K8 2307 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 146.7 ms