RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 PlaurP35456 327 aa5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Zswim8Q3UHH1 1832 aaKnown RBP5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Rnf144bQ8BKD6 301 aa5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 TeppQ6IMH0 216 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Lhfpl1Q80SV1 220 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 PoleQ9WVF7 2283 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Igkv9-123A0A140T8N8 117 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 A230072I06RikQ3UUJ8 172 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gpr179E9PY61 2293 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ighv1-53A0A075B5W3 117 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Trav9-2A0A075B647 113 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Trav9-4A0A0B4J1K2 113 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 B230359F08RikA0A0B4J1K3 109 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 P01748 117 aa5.93□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm17606F6ZL36 78 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 AmelxP63277 210 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 AW146154Q3TPQ7 468 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm16503Q8C6M9 103 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 4930535I16RikQ9CUI2 172 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Sptbn2Q68FG2 2388 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Cox8cA6H666 72 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Tcte2E9PY37 120 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 OdaphJ3QNT8 126 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 P01789 122 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 D930007J09RikQ9D2K6 131 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 4930564D02RikQ9D4S4 103 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Cacna1iE9Q7P2 2199 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 P01823 113 aa5.92□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Trav13-4-dv7A0A075B6C2 110 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm9970F6ZED4 185 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Obox2E9PXV9 151 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 UqcrqQ9CQ69 82 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ighv1-5A0A0A6YWG2 117 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Cep290Q6A078 2472 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Trav13d-1A0A075B606 110 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm17359A0A0G2JEB7 487 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Rpl39P62892 51 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Igkv8-19A0A0G2JFN8 121 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm21994F6T2D2 329 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm9805F6YK59 57 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 P0C913 63 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Csrp3P50462 194 aa5.91□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Znf672Q99LH4 468 aa5.9□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 StrcQ8VIM6 1809 aa5.9□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 NpbQ8K4P1 119 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ramp1Q9WTJ5 148 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 VirmaA2AIV2 1811 aaKnown RBP5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Med12lQ8BQM9 2157 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Wfdc15aQ8BH89 80 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Higd2aQ9CQJ1 106 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 PhipQ8VDD9 1821 aaKnown RBP5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Cacna1hO88427 2365 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ptprz1B9EKR1 2312 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Q9DAQ5 155 aa5.9□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Tln2Q71LX4 2375 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm10384Q3UQ87 92 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Znrd1Q791N7 123 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Pappa2E9PZ87 1789 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 1520401A03RikA0A0J9YVH6 598 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm15557A6PWY0 234 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm8439G3UWA7 96 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 9930021J03RikH3BKP8 2027 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm42674D3YUT9 64 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Fstl3Q9EQC7 256 aa5.89□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 F8Q06194 2319 aa5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 BC107364E9Q5A2 140 aa5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Polr2aP08775 1970 aaKnown RBP5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ly6c1P0CW02 131 aa5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 PscaP57096 123 aa5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Asxl3Q8C4A5 2259 aa5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ntf4Q80VU4 209 aa5.88□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Pip4p1Q3TWL2 284 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm6899Q3USS0 134 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm10542F6XDR3 90 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Rpl28P41105 137 aaKnown RBP5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 BtcQ05928 177 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Spry2Q9QXV8 315 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ighv12-3A0A075B5T1 117 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ighv2-6A0A075B6A7 116 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm4707V9GXN5 68 aa5.87□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Sprr2jO70561 109 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 C130032M10RikQ8C888 123 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Odf3Q920N1 254 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 NynrinQ5DTZ0 1840 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Fam19a5Q91WE9 132 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Dock2Q8C3J5 1828 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Dock6Q8VDR9 2080 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 BC025920Q3US60 128 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ighv1-85A0A075B5Y6 117 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Trbv13-1A0A0B4J1P8 112 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm11011D3Z3L9 86 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm10553J3QPF1 123 aa5.86□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ighv1-63A0A075B5X2 117 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Klk5Q9D140 293 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Psme4Q5SSW2 1843 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Trpm7Q923J1 1863 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 SycnQ8VCK7 134 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 FAM186AQ9D9R9 1790 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 P01630 113 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Gm10881P01642 115 aa5.85□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms