RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 P01630 113 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Fancd2osQ9D4K4 178 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Klk11Q9QYN3 276 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ube2d4D3YUH6 135 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Iglc2P01844 104 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 C1qcQ02105 246 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Defb30Q30KN4 75 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 AW146154Q3TPQ7 468 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 A930003A15RikQ3U552 87 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 A230072I06RikQ3UUJ8 172 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Q8K1L6 76 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 3110018I06RikQ9CXS0 120 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Heatr5bQ8C547 2070 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 A0A1Y7VLU2 103 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cela2aP05208 271 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 1500011B03RikQ3TTH7 73 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tmem190Q9D2E9 166 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 LenepQ9WVB6 61 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cacna1eQ61290 2272 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P04945 108 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 BC048562Q80ZQ7 204 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Rnf152Q8BG47 203 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 BC049762Q8C601 163 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Leap2Q91V13 76 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Lyg1Q9D7Q0 197 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Wdr90Q6ZPG2 1874 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Trav12d-3A0A075B6A4 115 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv7-2A0A0A6YX91 119 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 C920008G01RikA0A0B4J1N1 112 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P01658 132 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P0C1Z5 52 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Rpl15Q9CZM2 204 aaKnown RBP4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Pygo1Q9D0P5 417 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 A0A286YE49 62 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Them7Q9DCP4 223 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Pmaip1Q9JM54 103 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv1-80A0A075B5Y3 117 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Smim10l1A0A087WNQ7 89 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv13-2A0A0A6YWN3 119 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 NpyP57774 97 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Sslp1Q3UN54 99 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ang2Q64438 145 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cox7b2Q9D2H1 82 aa4.48□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Krtap28-10A0A1Y7VP58 119 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm17521F6QAC8 156 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Smr2O09133 150 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P01793 123 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm9573F7C950 1606 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Trbv14A0A140T8L9 115 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm17455G3UW87 128 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P01660 111 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccl6P27784 116 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Loxl1P97873 607 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Rnf144bQ8BKD6 301 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tmem223Q9CQE2 199 aaKnown RBP4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccl24Q9JKC0 119 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv8-12A0A0G2JDE1 119 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm2564F6Z9S8 108 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccl19O70460 108 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ube2d1P61080 147 aaKnown RBP4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cdkn2aQ64364 169 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gphb5Q812B2 130 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Trbv16A0A0B4J1H3 115 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Igkv8-30A0A140T8M3 121 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Zfp36l1P23950 338 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 TeppQ6IMH0 216 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tm2d2Q8R0I4 213 aa4.47□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 GfyJ3KML8 504 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Pom121l2Q5SW25 972 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Zc2hc1aQ8BJH1 324 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 EnhoQ8K1D8 76 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Rpp25lQ99JH1 163 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Wdr38Q9D994 303 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Prok2Q9QXU7 128 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Fxyd1Q9Z239 92 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Abca7Q91V24 2159 aa4.46□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Zfp11P10751 647 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Cox7bP56393 80 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Ighv6-7A0A0A6YWU3 119 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Pax9P47242 342 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 PpbpQ9EQI5 113 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 TectaO08523 2155 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Trav9-4A0A0B4J1K2 113 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Ighv1-77A0A0G2JGS9 117 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Cox8cA6H666 72 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 E030018B13RikJ3QMS9 113 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Rpl35aO55142 110 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Rnase1P00683 149 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Q8BTC1 67 aa4.46□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Ighv10-1A0A0B4J1J6 119 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 3110021N24RikJ3QMN2 152 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 P01786 117 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 P01789 122 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 GrnP28798 589 aaKnown RBP4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Camk2n2Q78WH7 79 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Zc2hc1bQ9D534 172 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Igkv2-109A0A075B5K6 120 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Igkv1-110A0A0B4J1I0 119 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 Igkv3-12A0A140T8P0 119 aa4.45□□□□□ -1.7
Pcdh9-202ENSMUST00000192221 9430015G10RikA2ASP7 199 aa4.45□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 88 ms