RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Gm10295Q8CCF3 114 aa6.84□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ankrd17Q99NH0 2603 aaKnown RBP6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 2310009B15RikA0A0A6YWI4 143 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 RetnQ99P87 114 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Defb2P82020 71 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm12689Q8BQU9 117 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Rnase2aQ8K196 155 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Mrpl36Q99N90 102 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 PtprqP0C5E4 2300 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Igkv2-137A0A0B4J1H6 120 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Trbv17A0A140T8P8 114 aa6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ndufa4Q62425 82 aaKnown RBP6.83□□□□□ -1.32
Col28a1-201ENSMUST00000115537 FlnaQ8BTM8 2647 aaKnown RBP6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 CirbpP60824 172 aaKnown RBP6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 A730015C16RikQ8C992 119 aa6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Trav21-dv12A0A075B6C4 109 aa6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ube2e1P52482 193 aa6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Prss58Q8BW11 241 aa6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Dnal4Q9DCM4 105 aa6.82□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ighv8-5A0A0A6YY60 119 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm36368A0A1D5RLK8 91 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Il1f10Q8R459 152 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Mast4Q811L6 2618 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Dlx6P70397 175 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Mob4Q6PEB6 225 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 P18527 97 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 4930544G11RikQ9CR99 193 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Wdr38Q9D994 303 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Rtl10D3YWW5 146 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm21994F6T2D2 329 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ly6lH3BJG9 140 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Olfr313Q5NC55 308 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Rnf185Q91YT2 192 aa6.81□□□□□ -1.32
Col28a1-201ENSMUST00000115537 SpegQ62407 3262 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm5089A1L3C8 106 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm20726G3UX18 150 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Pglyrp4Q0VB07 374 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Foxi2Q3I5G5 311 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Iah1Q9DB29 249 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Dmxl2Q8BPN8 3032 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Smim10l1A0A087WNQ7 89 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ighv1-23A0A0A6YVW3 117 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 C920008G01RikA0A0B4J1N1 112 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Fam110dQ80X91 271 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Chchd5Q9CQP3 110 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Phpt1Q9DAK9 124 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Zfp951A0A087WRH0 451 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Amn1B8JKV0 258 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 P01727 129 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm9949Q8C9F4 104 aa6.8□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Sdhaf1Q3U276 118 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Triap1Q9D8Z2 76 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 NbeaQ9EPN1 2936 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ighv1-69A0A0G2JFS5 117 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 B430305J03RikQ8BQQ8 176 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Defa21Q8C1P2 93 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Spata25Q9DA57 226 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Higd1aQ9JLR9 95 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Snai3Q9QY31 287 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Trav7-6A0A075B640 112 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Olfr311Q5NC59 308 aa6.79□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Lect2O88803 151 aa6.78□□□□□ -1.32
Col28a1-201ENSMUST00000115537 P01812 117 aa6.78□□□□□ -1.32
Col28a1-201ENSMUST00000115537 P04943 107 aa6.78□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Phlda3Q9WV95 125 aa6.78□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm11020F6ZGD5 61 aa6.78□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Q8R092 253 aa6.77□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Ube2d3P61079 147 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Hist1h4aP62806 103 aaKnown RBP6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ube2d2P62838 147 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Prok1Q14A28 105 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 SpinklQ8CEK3 90 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Rnf183Q8QZS5 190 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Mllt11P97783 90 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Atp6v0e1Q9CQD8 81 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 RhohQ9D3G9 191 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ovol1Q9WTJ2 267 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Wisp2Q9Z0G4 251 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ubr5Q80TP3 2792 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm10521E9PZK0 135 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 P04944 107 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ube2d1P61080 147 aaKnown RBP6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 H1fxQ80ZM5 188 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 9130230L23RikQ8CC80 163 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Morn5Q9DAI9 170 aa6.77□□□□□ -1.33
Col28a1-201ENSMUST00000115537 P01643 108 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Atp5g3P56384 141 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ndufa4l2Q4FZG9 87 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ang5Q5GAN1 145 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Smr3aQ61900 147 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Trav4d-3A0A075B625 110 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Igkv4-81A0A0G2JEY5 119 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gp9O88186 177 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Prelid3aQ8VE85 172 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gcn1E9PVA8 2671 aaKnown RBP6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Hbb-b2P02089 147 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Znf239P24399 201 aa6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Snrpd3P62320 126 aaKnown RBP6.76□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Xcl1P47993 114 aa6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Lmo4P61969 165 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms