RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Synj2bpQ9D6K5 145 aa10.97□□□□□ -0.65
Syn1-202ENSMUST00000115345 Cacna1aP97445 2368 aa10.97□□□□□ -0.65
Syn1-202ENSMUST00000115345 Arfgef3Q3UGY8 2170 aa10.97□□□□□ -0.65
Syn1-202ENSMUST00000115345 4933414I15RikQ9D4D5 133 aa10.97□□□□□ -0.65
Syn1-202ENSMUST00000115345 Ighv1-74A0A0G2JGK2 117 aa10.96□□□□□ -0.65
Syn1-202ENSMUST00000115345 Rbm3O89086 153 aaKnown RBP10.96□□□□□ -0.65
Syn1-202ENSMUST00000115345 P01750 117 aa10.96□□□□□ -0.65
Syn1-202ENSMUST00000115345 Dlx1Q64317 255 aa10.96□□□□□ -0.65
Syn1-202ENSMUST00000115345 Gm28038F7BCN9 126 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ppp1r32Q148A4 427 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 4930519P11RikQ9CUJ8 166 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 Fbn2Q61555 2907 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ighv5-6A0A075B5Q0 117 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 Igkv14-130A0A0G2JF45 117 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 P01820 115 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 A930002H24RikQ8C8Y3 163 aa10.96□□□□□ -0.66
Syn1-202ENSMUST00000115345 Kiaa1549Q68FD9 1940 aa10.95□□□□□ -0.66
Syn1-202ENSMUST00000115345 Cacna1iE9Q7P2 2199 aa10.95□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ube2d4D3YUH6 135 aa10.94□□□□□ -0.66
Syn1-202ENSMUST00000115345 Pkd1l2Q7TN88 2461 aa10.94□□□□□ -0.66
Syn1-202ENSMUST00000115345 KprpB2RUR4 657 aa10.94□□□□□ -0.66
Syn1-202ENSMUST00000115345 Timm8a2Q4FZG7 97 aa10.94□□□□□ -0.66
Syn1-202ENSMUST00000115345 Mob4Q6PEB6 225 aa10.94□□□□□ -0.66
Syn1-202ENSMUST00000115345 Pate4Q09098 99 aa10.94□□□□□ -0.66
Syn1-202ENSMUST00000115345 Trav7-1A0A0G2JEV5 112 aa10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Znf740Q6NZQ6 180 aa10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Gm12689Q8BQU9 117 aa10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ccl7Q03366 97 aa10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ang5Q5GAN1 145 aa10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Znrd1Q791N7 123 aa10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Gcn1E9PVA8 2671 aaKnown RBP10.93□□□□□ -0.66
Syn1-202ENSMUST00000115345 Zfhx3Q61329 3726 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 Igkv2-137A0A0B4J1H6 120 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 CnfnQ6PCW6 111 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 Spint4Q9D263 159 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 P01680 129 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 Crip1P63254 77 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 Smim26Q3V460 107 aa10.92□□□□□ -0.66
Syn1-202ENSMUST00000115345 Igkv6-25A0A140T8N7 115 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Iqcf6G3UWF2 157 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Lyrm9Q3UN90 78 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Klk15Q8CGR4 254 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Gm33815A0A087WNV3 176 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Lect2O88803 151 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 A730015C16RikQ8C992 119 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Timm21Q8CCM6 249 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Lypd8Q9D7S0 255 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Med13Q5SWW4 2171 aa10.91□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ighv1-9A0A0A6YW37 117 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 OtosQ8R448 89 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 4930535I16RikQ9CUI2 172 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ins1P01325 108 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 ErhP84089 104 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 Q8VC23 124 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ubr5Q80TP3 2792 aa10.9□□□□□ -0.66
Syn1-202ENSMUST00000115345 Ly6eQ64253 130 aa10.9□□□□□ -0.67
Syn1-202ENSMUST00000115345 Cpsf4lE9Q2N0 280 aa10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 GgnQ80WJ1 673 aa10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 Lyg1Q9D7Q0 197 aa10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 Spta1P08032 2415 aa10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 CnbpP53996 178 aaKnown RBP10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 Tnfrsf22Q9ER62 198 aa10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ighv1-53A0A075B5W3 117 aa10.89□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ptpn13Q64512 2453 aa10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm2564F6Z9S8 108 aa10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ccl19O70460 108 aa10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Rpl28P41105 137 aaKnown RBP10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Iah1Q9DB29 249 aa10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Defb5Q9EPV9 64 aa10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Wdr31Q9JHB4 367 aa10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Fhl1P97447 280 aaKnown RBP10.88□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ighv7-1A0A075B5S2 121 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm19345G3UYD9 124 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Vpreb2P13373 142 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 CdsnQ7TPC1 561 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 BikO70337 150 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ighv1-62-3P01754 117 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ndufb3Q9CQZ6 104 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Iglv3A0A0B4J1K5 122 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ovol3D3YYM0 189 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm20708H3BKF4 155 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Dnal4Q9DCM4 105 aa10.87□□□□□ -0.67
Syn1-202ENSMUST00000115345 Ccl6P27784 116 aa10.86□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm12888Q3UW77 119 aa10.86□□□□□ -0.67
Syn1-202ENSMUST00000115345 Cysrt1Q9D1E4 142 aa10.86□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm21748Q3UE70 102 aa10.86□□□□□ -0.67
Syn1-202ENSMUST00000115345 5730596B20RikQ8BQ08 205 aa10.86□□□□□ -0.67
Syn1-202ENSMUST00000115345 Urb1Q571H0 2274 aaKnown RBP10.86□□□□□ -0.67
Syn1-202ENSMUST00000115345 A0A286YE02 88 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Rnase2bO35292 155 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Trav6d-4Q5R1I0 115 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 SpenQ62504 3644 aaKnown RBP10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Lrrk2Q5S006 2527 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Igkv14-100A0A0G2JG36 117 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm20219A0A1B0GRQ3 87 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Zfyve26Q5DU37 2529 aa10.85□□□□□ -0.67
Syn1-202ENSMUST00000115345 Gm5093E9PZB3 174 aa10.84□□□□□ -0.67
Syn1-202ENSMUST00000115345 Asxl3Q8C4A5 2259 aa10.83□□□□□ -0.68
Syn1-202ENSMUST00000115345 P0C1Z5 52 aa10.83□□□□□ -0.68
Syn1-202ENSMUST00000115345 Mrpl36Q99N90 102 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms