RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Trav6-4A0A075B6B4 115 aa7.27□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm28374F6SG70 93 aa7.27□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 NrgnP60761 78 aa7.27□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Defa20Q45VN2 95 aa7.27□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Zfand3Q497H0 227 aa7.27□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Pkd1l3Q2EG98 2201 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv1-80A0A075B5Y3 117 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm17472A0A075B683 117 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv5-9-1A0A0A6YVS4 126 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 4930415O20RikQ8CDT5 131 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gkn1Q9CR36 201 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 PoleQ9WVF7 2283 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 PinlypQ9CQD7 212 aa7.26□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Col6a3E9PWQ3 3284 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv1-4A0A075B5T4 117 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm7849D3YX03 116 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 AngP21570 145 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Cops9Q3U898 57 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Polr2kQ63871 58 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 5730596B20RikQ8BQ08 205 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Naa38Q9D2U5 125 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ube2d4D3YUH6 135 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 P01643 108 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 S100a4P07091 101 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Sdk1Q3UH53 2193 aa7.25□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm10521E9PZK0 135 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 PemtQ61907 199 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Defb5Q9EPV9 64 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Higd1aQ9JLR9 95 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv1-62-1A0A075B5U3 116 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm5878E9PUB3 99 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 3110021N24RikJ3QMN2 152 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Eif4ebp3Q80VV3 101 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm9958Q8C9U4 106 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ucn2Q99ML8 113 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Phpt1Q9DAK9 124 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Dnal4Q9DCM4 105 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 HampQ9EQ21 83 aa7.24□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm7102J3QQ10 178 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ccl19O70460 108 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 CstadQ9D245 104 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Lyzl4Q9D925 145 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm9887F6RFI0 207 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Mrps12O35680 139 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 OtosQ8R448 89 aa7.23□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 SpegQ62407 3262 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv7-3A0A075B5R2 120 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv2-3A0A075B696 115 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Igkv4-81A0A0G2JEY5 119 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Znf740Q6NZQ6 180 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 4930556J24RikQ9D4U7 146 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Zdbf2Q5SS00 2493 aaKnown RBP7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 DmdP11531 3678 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Egr1P08046 533 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 FcorP0DJI6 106 aa7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Urb1Q571H0 2274 aaKnown RBP7.22□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ighv1-53A0A075B5W3 117 aa7.21□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Krtap27-1E9PX37 202 aa7.21□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Ins2P01326 110 aa7.21□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Asphd1Q2TA57 360 aa7.21□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Gm4861Q8C5A4 106 aa7.21□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Kiaa0100Q5SYL3 2234 aa7.21□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-12A0A0A6YXJ9 117 aa7.21□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-69A0A0G2JFS5 117 aa7.21□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ppp1r32Q148A4 427 aa7.21□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Tmem254aP0DN89 123 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Tmem254bP0DN90 123 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Tmem254cP0DN91 123 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 LoxP28301 411 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Dmxl1Q6PNC0 3013 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv3-4A0A0A6YXF1 117 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ccl4P14097 92 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 AvpP35455 168 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Rmi2Q3UPE3 149 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 B230104I21RikQ3USW4 141 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 CdsnQ7TPC1 561 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 CrygfQ9CXV3 174 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 AtrxQ61687 2476 aaKnown RBP7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 AspmQ8CJ27 3122 aa7.2□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Gm36368A0A1D5RLK8 91 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Acyp1P56376 99 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Fam216bQ8CC14 138 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Fam216aQ9DB54 251 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 SnurfQ9WU12 71 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Trbv13-1A0A0B4J1P8 112 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 A630023A22RikJ3QP60 199 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 9230109A22RikQ8BHE6 111 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Igkv6-23A0A140T8N5 115 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 1700056E22RikF7CNM6 234 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Rpl28P41105 137 aaKnown RBP7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Cd59bP58019 129 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 A530084C06RikQ3UTW2 186 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Fam110dQ80X91 271 aa7.19□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-66A0A075B5X5 117 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Igkv4-59A0A0B4J1I8 117 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Spata46Q4FZF2 204 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ly6hQ9WUC3 139 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Prune2Q52KR3 3084 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv4-1A0A075B5R5 116 aa7.18□□□□□ -1.26
Hmgb1-201ENSMUST00000085546 Ighv1-75A0A075B5Y2 117 aa7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms