RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 BlcapP62951 87 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Lypd6Q8BPP5 171 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 HampQ9EQ21 83 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Wfdc15bQ9JHY4 80 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Gm28269A0A087WSG3 125 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Ighv6-7A0A0A6YWU3 119 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Znhit3Q9CQK1 151 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Adamts20P59511 1906 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Lrp4Q8VI56 1905 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Defa1P11477 93 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 AW146154Q3TPQ7 468 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 A530064D06RikQ8BNV8 229 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Zmat4Q8BZ94 229 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Rasl10aQ8K5A4 203 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Odf3Q920N1 254 aa7.94□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Fam240bJ3QMB3 78 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Cox7cP17665 63 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Smim26Q3V460 107 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Ighv2-6A0A075B6A7 116 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Vsig4F6TUL9 280 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Cd33Q63994 403 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Wfdc2Q9DAU7 174 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Igkv3-9A0A140T8P4 119 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 NpyP57774 97 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Ndufa4l2Q4FZG9 87 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Mapk1ip1lQ8BH93 242 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Leap2Q91V13 76 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Lage3Q9CR70 148 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Rnf114Q9ET26 229 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Bex1Q9R224 128 aa7.93□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Lmo4P61969 165 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Morn5Q9DAI9 170 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Fam216aQ9DB54 251 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Gm10553J3QPF1 123 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Lect2O88803 151 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Spata25Q9DA57 226 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Timm17aQ9Z0V8 171 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 LeprotO89013 131 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Ube2wQ8VDW4 151 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Q99M08 65 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Trav9-2A0A075B647 113 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Trav9-4A0A0B4J1K2 113 aa7.92□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Dad1P61804 113 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Fam24aQ8CF27 98 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 SonQ9QX47 2444 aaKnown RBP7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 SpinklQ8CEK3 90 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Dido1Q8C9B9 2256 aaKnown RBP7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Igkv3-1A0A075B5P1 119 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Igkv4-57A0A0A6YYE7 117 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 P01753 117 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Pla2g2cP48076 150 aa7.91□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 MalO09198 153 aa7.9□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Usf3B2RUQ2 2221 aa7.9□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Igkv2-137A0A0B4J1H6 120 aa7.9□□□□□ -1.14
Ccdc40-201ENSMUST00000035935 Igkv8-24A0A140T8P5 121 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm20481G3UXK4 153 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Odf1Q61999 247 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Insl3O09107 122 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 E130116L18RikQ8BMV6 101 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Tspan13Q9D8C2 204 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Tcf24V9GWT9 166 aa7.9□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Ighv1-75A0A075B5Y2 117 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm10604Q3V0X7 143 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Dand5Q76LW6 185 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Arfgef3Q3UGY8 2170 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm9936Q8C864 160 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Sprr3O09116 238 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 P0C913 63 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Mpv17l2Q8VIK2 200 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Trav4d-3A0A075B625 110 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 P01820 115 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Xcl1P47993 114 aa7.89□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Trav4-3A0A0B4J1K1 110 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Pglyrp1O88593 182 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 TncQ80YX1 2110 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Ighv12-3A0A075B5T1 117 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 P01837 106 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Hoxd3P09027 433 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Plscr4P58196 326 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm10295Q8CCF3 114 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Ighv2-7A0A075B5Q8 116 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Egr2P08152 470 aa7.88□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Spag11Q8K4N2 71 aa7.87□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Med12A2AGH6 2190 aa7.87□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Tcte2E9PY37 120 aa7.87□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm5089A1L3C8 106 aa7.87□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Defa23Q5G866 93 aa7.87□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 BC048502Q80Y74 154 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm9913Q8BQQ2 135 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Nop10Q9CQS2 64 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm9573F7C950 1606 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Snai3Q9QY31 287 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Heatr5aQ5PRF0 2038 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm9513B3GLJ6 99 aa7.86□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Ighv1-82A0A0G2JEU7 117 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Socs3O35718 225 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Znf239P24399 201 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Foxi2Q3I5G5 311 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Defa26Q3L180 93 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gphb5Q812B2 130 aa7.85□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms