RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 9230102O04RikA2ASX7 82 aa13.14□□□□□ -0.31
Col17a1-201ENSMUST00000026045 P01756 117 aa13.14□□□□□ -0.31
Col17a1-201ENSMUST00000026045 P01757 117 aa13.14□□□□□ -0.31
Col17a1-201ENSMUST00000026045 OtosQ8R448 89 aa13.14□□□□□ -0.31
Col17a1-201ENSMUST00000026045 AmelxP63277 210 aa13.14□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Igkv20-101-2A0A0G2JDU3 113 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Gm9513B3GLJ6 99 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Wdr38Q9D994 303 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Ncor2Q9WU42 2472 aaKnown RBP13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Gm20730A0A075B5J6 119 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Odf3Q920N1 254 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Sdk2Q6V4S5 2176 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 4930447F04RikA2AFR2 126 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Gm14137Q8CE97 175 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Sdk1Q3UH53 2193 aa13.13□□□□□ -0.31
Col17a1-201ENSMUST00000026045 PkdrejQ9Z0T6 2126 aa13.12□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Ighv1-69A0A0G2JFS5 117 aa13.12□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Nbl1Q61477 178 aa13.12□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Col5a3Q9JLI2 1739 aa13.12□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Ighv2-6A0A075B6A7 116 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Gm42674D3YUT9 64 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 AngP21570 145 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Trav9d-4A0A0G2JG37 103 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Vsig4F6TUL9 280 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Fgf6P21658 208 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 A230072I06RikQ3UUJ8 172 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Loxl1P97873 607 aa13.11□□□□□ -0.31
Col17a1-201ENSMUST00000026045 CadB2RQC6 2225 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Tmem254aP0DN89 123 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Tmem254bP0DN90 123 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Tmem254cP0DN91 123 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Pygo1Q9D0P5 417 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Ighv1-80A0A075B5Y3 117 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 PemtQ61907 199 aa13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 CenpeQ6RT24 2474 aaKnown RBP13.1□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Igkv4-59A0A0B4J1I8 117 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Fancd2osQ9D4K4 178 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Lst1O08843 95 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Gm20481G3UXK4 153 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 3110018I06RikQ9CXS0 120 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Igkv4-61A0A0G2JH00 117 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Nckap5E9QAE1 1909 aa13.09□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Trav4-3A0A0B4J1K1 110 aa13.08□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Igkv4-54A0A0G2JES9 117 aa13.08□□□□□ -0.32
Col17a1-201ENSMUST00000026045 P01812 117 aa13.08□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Gm10192Q3V0S1 108 aa13.08□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Gm44965A0A0N4SVR3 59 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Ighv8-12A0A0G2JDE1 119 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 P01725 110 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Gm5468Q8C3D3 155 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 AvpP35455 168 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Taf15Q8BQ46 557 aaKnown RBP13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Mrps12O35680 139 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Atp6v0e1Q9CQD8 81 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Ifitm1Q9D103 106 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Igkv4-58A0A0G2JGI6 119 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Ang3P97802 145 aa13.07□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Crybg1A0A0G2JG52 2065 aa13.06□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Trav6-4A0A075B6B4 115 aa13.06□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Prok1Q14A28 105 aa13.06□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Igkv4-72A0A0B4J1I4 117 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Gm12253Q5NC48 229 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Dad1P61804 113 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Ighv1-55A0A075B5W6 117 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Igkv4-57A0A0A6YYE7 117 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Sox16Q62247 57 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Naa38Q9D2U5 125 aa13.05□□□□□ -0.32
Col17a1-201ENSMUST00000026045 A730015C16RikQ8C992 119 aa13.04□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Ang4Q3TMQ6 144 aa13.04□□□□□ -0.32
Col17a1-201ENSMUST00000026045 ArtnQ9Z0L2 224 aa13.03□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Nup210Q9QY81 1886 aaKnown RBP13.03□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Usmg5Q78IK2 58 aa13.03□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Gm20708H3BKF4 155 aa13.03□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Acyp1P56376 99 aa13.02□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Dpm3Q9D1Q4 92 aa13.02□□□□□ -0.32
Col17a1-201ENSMUST00000026045 P01728 117 aa13.02□□□□□ -0.32
Col17a1-201ENSMUST00000026045 4933414I15RikQ9D4D5 133 aa13.02□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Arfgef3Q3UGY8 2170 aa13.02□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Col24a1Q30D77 1733 aa13.02□□□□□ -0.32
Col17a1-201ENSMUST00000026045 Psmb8P28063 276 aa13.02□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Ccl19O70460 108 aa13.02□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Ucn2Q99ML8 113 aa13.02□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Ube2e1P52482 193 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Spata25Q9DA57 226 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Igkv4-69A0A0B4J1I6 116 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Igkv8-24A0A140T8P5 121 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Triap1Q9D8Z2 76 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Q08AU9 97 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Fam110aQ8R184 296 aa13.01□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Mrpl35Q9CQL6 188 aa13□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Reg3dQ9QUS9 175 aa13□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Smrp1Q2MH31 260 aa13□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Cxcl14Q9WUQ5 99 aa13□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Obox8V9GWY9 217 aa13□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Zmat4Q8BZ94 229 aa12.99□□□□□ -0.33
Col17a1-201ENSMUST00000026045 SonQ9QX47 2444 aaKnown RBP12.99□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Prr12E9PYL2 2035 aaKnown RBP12.99□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Timm17aQ9Z0V8 171 aa12.99□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Defb12Q8K4N3 78 aa12.99□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Ang2Q64438 145 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms