RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 GSH2Q08220 491 aa1.94□□□□□ -2.1
snR55snR55 HXT4P32467 576 aa1.93□□□□□ -2.1
snR55snR55 PEF1P53238 335 aa1.93□□□□□ -2.1
snR55snR55 UBP16Q02863 499 aa1.93□□□□□ -2.1
snR55snR55 YHM2Q04013 314 aa1.93□□□□□ -2.1
snR55snR55 PLM2Q04383 521 aa1.93□□□□□ -2.1
snR55snR55 ECM22Q05958 814 aaPredicted RBP1.93□□□□□ -2.1
snR55snR55 YOR389WQ08912 624 aa1.93□□□□□ -2.1
snR55snR55 CDC23P16522 626 aa1.92□□□□□ -2.1
snR55snR55 CBP3P21560 335 aa1.92□□□□□ -2.1
snR55snR55 PLC1P32383 869 aa1.92□□□□□ -2.1
snR55snR55 PRP19P32523 503 aaKnown RBP1.92□□□□□ -2.1
snR55snR55 OCA5P38738 679 aa1.92□□□□□ -2.1
snR55snR55 RAD26P40352 1085 aa1.92□□□□□ -2.1
snR55snR55 SDA1P53313 767 aaKnown RBP1.92□□□□□ -2.1
snR55snR55 IMP4P53941 290 aaKnown RBP1.92□□□□□ -2.1
snR55snR55 YER175W-AQ8TGU4 54 aa1.92□□□□□ -2.1
snR55snR55 SES1P07284 462 aaKnown RBP1.91□□□□□ -2.1
snR55snR55 GSH1P32477 678 aa1.91□□□□□ -2.1
snR55snR55 SLX1P38324 304 aa1.91□□□□□ -2.1
snR55snR55 MAM1P40065 302 aa1.91□□□□□ -2.1
snR55snR55 LAS21P40367 830 aa1.91□□□□□ -2.1
snR55snR55 SQS1P53866 767 aaKnown RBP1.91□□□□□ -2.1
snR55snR55 YNL144CP53907 740 aa1.91□□□□□ -2.1
snR55snR55 YML053CQ04978 212 aa1.91□□□□□ -2.1
snR55snR55 SEC1P30619 724 aaKnown RBP1.9□□□□□ -2.11
snR55snR55 MNN2P38069 597 aa1.9□□□□□ -2.11
snR55snR55 ARN1P38731 627 aa1.9□□□□□ -2.11
snR55snR55 PCL6P40038 420 aa1.9□□□□□ -2.11
snR55snR55 QRI7P43122 407 aa1.9□□□□□ -2.11
snR55snR55 COS12P53053 380 aa1.9□□□□□ -2.11
snR55snR55 SND1Q04007 877 aa1.9□□□□□ -2.11
snR55snR55 FMP42Q04991 504 aa1.9□□□□□ -2.11
snR55snR55 YLR281CQ05863 155 aa1.9□□□□□ -2.11
snR55snR55 YLR352WQ06479 807 aa1.9□□□□□ -2.11
snR55snR55 YDL242WQ07746 117 aa1.9□□□□□ -2.11
snR55snR55 SEC12P11655 471 aa1.89□□□□□ -2.11
snR55snR55 RPL8AP17076 256 aaKnown RBP1.89□□□□□ -2.11
snR55snR55 DGR2P32330 852 aa1.89□□□□□ -2.11
snR55snR55 NIC96P34077 839 aa1.89□□□□□ -2.11
snR55snR55 RKM3P38222 552 aa1.89□□□□□ -2.11
snR55snR55 EXO84P38261 753 aa1.89□□□□□ -2.11
snR55snR55 EFM2P38347 419 aa1.89□□□□□ -2.11
snR55snR55 VPS41P38959 992 aa1.89□□□□□ -2.11
snR55snR55 GZF3P42944 551 aaKnown RBP1.89□□□□□ -2.11
snR55snR55 ORC5P50874 479 aa1.89□□□□□ -2.11
snR55snR55 NGL1Q08213 363 aaKnown RBP1.89□□□□□ -2.11
snR55snR55 GPN2Q08726 347 aaPredicted RBP1.89□□□□□ -2.11
snR55snR55 RSA1Q08932 381 aa1.89□□□□□ -2.11
snR55snR55 APL5Q08951 932 aaKnown RBP1.89□□□□□ -2.11
snR55snR55 ATP12P22135 325 aa1.88□□□□□ -2.11
snR55snR55 ARG1P22768 420 aa1.88□□□□□ -2.11
snR55snR55 ARO9P38840 513 aaPredicted RBP1.88□□□□□ -2.11
snR55snR55 RRP8P38961 392 aaKnown RBP1.88□□□□□ -2.11
snR55snR55 AZF1P41696 914 aa1.88□□□□□ -2.11
snR55snR55 EAF7P53911 425 aaKnown RBP1.88□□□□□ -2.11
snR55snR55 YAT1P80235 687 aa1.88□□□□□ -2.11
snR55snR55 PTA1Q01329 785 aaPredicted RBP1.88□□□□□ -2.11
snR55snR55 MTQ2Q03920 221 aaPredicted RBP1.88□□□□□ -2.11
snR55snR55 TIP41Q12199 356 aa1.88□□□□□ -2.11
snR55snR55 PRP16P15938 1071 aaPredicted RBP1.87□□□□□ -2.11
snR55snR55 SAN1P22470 610 aa1.87□□□□□ -2.11
snR55snR55 CWH43P25618 953 aa1.87□□□□□ -2.11
snR55snR55 SER1P33330 395 aaKnown RBP1.87□□□□□ -2.11
snR55snR55 STB5P38699 743 aa1.87□□□□□ -2.11
snR55snR55 FAA2P39518 744 aa1.87□□□□□ -2.11
snR55snR55 ASG1P40467 964 aa1.87□□□□□ -2.11
snR55snR55 CDC1P40986 491 aa1.87□□□□□ -2.11
snR55snR55 IRC5P43610 853 aa1.87□□□□□ -2.11
snR55snR55 MNN11P46985 422 aaKnown RBP1.87□□□□□ -2.11
snR55snR55 RNH70P53331 553 aa1.87□□□□□ -2.11
snR55snR55 IZH1Q03419 316 aa1.87□□□□□ -2.11
snR55snR55 ARP9Q05123 467 aa1.87□□□□□ -2.11
snR55snR55 FPR4Q06205 392 aaPredicted RBP1.87□□□□□ -2.11
snR55snR55 NOP56Q12460 504 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
snR55snR55 KGD2P19262 463 aaPredicted RBP1.86□□□□□ -2.11
snR55snR55 AEP2P22136 580 aa1.86□□□□□ -2.11
snR55snR55 TYS1P36421 394 aaKnown RBP1.86□□□□□ -2.11
snR55snR55 BZZ1P38822 633 aa1.86□□□□□ -2.11
snR55snR55 KRE9P39005 276 aa1.86□□□□□ -2.11
snR55snR55 TPA1P40032 644 aaKnown RBP1.86□□□□□ -2.11
snR55snR55 MNT2P53059 558 aa1.86□□□□□ -2.11
snR55snR55 CUL3P53202 744 aa1.86□□□□□ -2.11
snR55snR55 TLG2Q08144 397 aa1.86□□□□□ -2.11
snR55snR55 YLR112WQ12130 139 aa1.86□□□□□ -2.11
snR55snR55 VPS5Q92331 675 aa1.86□□□□□ -2.11
snR55snR55 DID4P36108 232 aa1.85□□□□□ -2.11
snR55snR55 VBA2P38358 474 aaKnown RBP1.85□□□□□ -2.11
snR55snR55 ROK1P45818 564 aaPredicted RBP1.85□□□□□ -2.11
snR55snR55 YGL036WP53185 909 aaPredicted RBP1.85□□□□□ -2.11
snR55snR55 ESBP6P53918 673 aa1.85□□□□□ -2.11
snR55snR55 CRZ1P53968 678 aa1.85□□□□□ -2.11
snR55snR55 ORC1P54784 914 aaPredicted RBP1.85□□□□□ -2.11
snR55snR55 FCP1Q03254 732 aa1.85□□□□□ -2.11
snR55snR55 CAC2Q04199 468 aa1.85□□□□□ -2.11
snR55snR55 YTM1Q12024 460 aaPredicted RBP1.85□□□□□ -2.11
snR55snR55 NOP14Q99207 810 aaKnown RBP1.85□□□□□ -2.11
snR55snR55 URA3P03962 267 aa1.84□□□□□ -2.11
snR55snR55 REV1P12689 985 aa1.84□□□□□ -2.11
snR55snR55 YCR061WP25639 631 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms