RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W YMR317WQ04893 1140 aa3.58□□□□□ -1.84
BUD21YOR078W GET3Q12154 354 aaKnown RBP3.58□□□□□ -1.84
BUD21YOR078W YMR230W-AQ3E7B5 62 aa3.58□□□□□ -1.84
BUD21YOR078W YLR419WQ06698 1435 aaKnown RBP3.58□□□□□ -1.84
BUD21YOR078W ILS1P09436 1072 aaKnown RBP3.57□□□□□ -1.84
BUD21YOR078W RPS21AP0C0V8 87 aaKnown RBP3.57□□□□□ -1.84
BUD21YOR078W PRP19P32523 503 aaKnown RBP3.57□□□□□ -1.84
BUD21YOR078W RAD26P40352 1085 aa3.57□□□□□ -1.84
BUD21YOR078W VTC3Q02725 835 aa3.57□□□□□ -1.84
BUD21YOR078W RLP24Q07915 199 aaKnown RBP3.57□□□□□ -1.84
BUD21YOR078W RTC1Q08281 1341 aa3.57□□□□□ -1.84
BUD21YOR078W MYO2P19524 1574 aaKnown RBP3.56□□□□□ -1.84
BUD21YOR078W PDR10P51533 1564 aa3.56□□□□□ -1.84
BUD21YOR078W MYO4P32492 1471 aa3.56□□□□□ -1.84
BUD21YOR078W SSM4P40318 1319 aa3.56□□□□□ -1.84
BUD21YOR078W RRP43P25359 394 aaPredicted RBP3.56□□□□□ -1.84
BUD21YOR078W FMP46P36141 133 aaKnown RBP3.56□□□□□ -1.84
BUD21YOR078W SCO2P38072 301 aa3.56□□□□□ -1.84
BUD21YOR078W YIL169CP40442 995 aa3.56□□□□□ -1.84
BUD21YOR078W NNF2P53253 936 aa3.56□□□□□ -1.84
BUD21YOR078W DOS2P54858 310 aa3.56□□□□□ -1.84
BUD21YOR078W MTD1Q02046 320 aaKnown RBP3.56□□□□□ -1.84
BUD21YOR078W YML119WQ03208 357 aa3.56□□□□□ -1.84
BUD21YOR078W RTT103Q05543 409 aa3.56□□□□□ -1.84
BUD21YOR078W RAD34Q06665 692 aa3.56□□□□□ -1.84
BUD21YOR078W APM4Q99186 491 aa3.56□□□□□ -1.84
BUD21YOR078W YFL068WP0CX99 160 aa3.55□□□□□ -1.84
BUD21YOR078W YLL066W-AP0CY00 160 aa3.55□□□□□ -1.84
BUD21YOR078W YLL067W-AP0CY01 160 aa3.55□□□□□ -1.84
BUD21YOR078W SEC18P18759 758 aaKnown RBP3.55□□□□□ -1.84
BUD21YOR078W CBF5P33322 483 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
BUD21YOR078W MNN1P39106 762 aa3.55□□□□□ -1.84
BUD21YOR078W DSN1P40568 576 aa3.55□□□□□ -1.84
BUD21YOR078W YIR014WP40570 242 aa3.55□□□□□ -1.84
BUD21YOR078W CIR1P42940 261 aa3.55□□□□□ -1.84
BUD21YOR078W VPS4P52917 437 aa3.55□□□□□ -1.84
BUD21YOR078W HOS2P53096 452 aaPredicted RBP3.55□□□□□ -1.84
BUD21YOR078W YNL058CP53947 316 aa3.55□□□□□ -1.84
BUD21YOR078W ORC1P54784 914 aaPredicted RBP3.55□□□□□ -1.84
BUD21YOR078W PRP3Q03338 469 aaPredicted RBP3.55□□□□□ -1.84
BUD21YOR078W ARA2Q04212 335 aa3.55□□□□□ -1.84
BUD21YOR078W LYS21Q12122 440 aaKnown RBP3.55□□□□□ -1.84
BUD21YOR078W THO2P53552 1597 aaKnown RBP3.55□□□□□ -1.84
BUD21YOR078W EDE1P34216 1381 aa3.54□□□□□ -1.84
BUD21YOR078W AMD2P22580 549 aa3.54□□□□□ -1.84
BUD21YOR078W LTV1P34078 463 aa3.54□□□□□ -1.84
BUD21YOR078W SDH8P38345 138 aa3.54□□□□□ -1.84
BUD21YOR078W ERV46P39727 415 aa3.54□□□□□ -1.84
BUD21YOR078W TAN1P53072 289 aaPredicted RBP3.54□□□□□ -1.84
BUD21YOR078W PAN1P32521 1480 aa3.54□□□□□ -1.84
BUD21YOR078W RPL8AP17076 256 aaKnown RBP3.53□□□□□ -1.84
BUD21YOR078W DGR2P32330 852 aa3.53□□□□□ -1.84
BUD21YOR078W SFP1P32432 683 aa3.53□□□□□ -1.84
BUD21YOR078W RPS0AP32905 252 aaKnown RBP3.53□□□□□ -1.84
BUD21YOR078W SWE1P32944 819 aa3.53□□□□□ -1.84
BUD21YOR078W KES1P35844 434 aaKnown RBP3.53□□□□□ -1.84
BUD21YOR078W VPS24P36095 224 aaKnown RBP3.53□□□□□ -1.84
BUD21YOR078W DJP1P40564 432 aa3.53□□□□□ -1.84
BUD21YOR078W COG2P53271 262 aa3.53□□□□□ -1.84
BUD21YOR078W SQS1P53866 767 aaKnown RBP3.53□□□□□ -1.84
BUD21YOR078W YOR389WQ08912 624 aa3.53□□□□□ -1.84
BUD21YOR078W NUP170P38181 1502 aa3.53□□□□□ -1.84
BUD21YOR078W YPK9Q12697 1472 aa3.53□□□□□ -1.84
BUD21YOR078W CHO2P05374 869 aaKnown RBP3.52□□□□□ -1.85
BUD21YOR078W CNA1P23287 553 aa3.52□□□□□ -1.85
BUD21YOR078W HXT4P32467 576 aa3.52□□□□□ -1.85
BUD21YOR078W TPM2P40414 161 aa3.52□□□□□ -1.85
BUD21YOR078W YPT11P48559 417 aa3.52□□□□□ -1.85
BUD21YOR078W PEF1P53238 335 aa3.52□□□□□ -1.85
BUD21YOR078W IOC4Q04213 475 aa3.52□□□□□ -1.85
BUD21YOR078W ETT1Q08421 412 aaKnown RBP3.52□□□□□ -1.85
BUD21YOR078W MHP1P43638 1398 aa3.51□□□□□ -1.85
BUD21YOR078W IRC20Q06554 1556 aa3.51□□□□□ -1.85
BUD21YOR078W STU1P38198 1513 aa3.51□□□□□ -1.85
BUD21YOR078W PCT1P13259 424 aa3.51□□□□□ -1.85
BUD21YOR078W BYE1P36106 594 aa3.51□□□□□ -1.85
BUD21YOR078W VPS8P39702 1274 aa3.51□□□□□ -1.85
BUD21YOR078W SAP1P39955 897 aaKnown RBP3.51□□□□□ -1.85
BUD21YOR078W SKP2P42843 763 aa3.51□□□□□ -1.85
BUD21YOR078W GZF3P42944 551 aaKnown RBP3.51□□□□□ -1.85
BUD21YOR078W PTA1Q01329 785 aaPredicted RBP3.51□□□□□ -1.85
BUD21YOR078W UBP16Q02863 499 aa3.51□□□□□ -1.85
BUD21YOR078W GRX3Q03835 250 aa3.51□□□□□ -1.85
BUD21YOR078W LCB4Q12246 624 aa3.51□□□□□ -1.85
BUD21YOR078W RRI1Q12468 440 aa3.51□□□□□ -1.85
BUD21YOR078W SEC12P11655 471 aa3.5□□□□□ -1.85
BUD21YOR078W CBP3P21560 335 aa3.5□□□□□ -1.85
BUD21YOR078W CLB1P24868 471 aa3.5□□□□□ -1.85
BUD21YOR078W MSP1P28737 362 aa3.5□□□□□ -1.85
BUD21YOR078W PLC1P32383 869 aa3.5□□□□□ -1.85
BUD21YOR078W TCD1P38756 429 aa3.5□□□□□ -1.85
BUD21YOR078W VRG4P40107 337 aa3.5□□□□□ -1.85
BUD21YOR078W DIG1Q03063 452 aaKnown RBP3.5□□□□□ -1.85
BUD21YOR078W VPS60Q03390 229 aa3.5□□□□□ -1.85
BUD21YOR078W MTQ2Q03920 221 aaPredicted RBP3.5□□□□□ -1.85
BUD21YOR078W ECM16Q04217 1267 aaKnown RBP3.5□□□□□ -1.85
BUD21YOR078W ECM22Q05958 814 aaPredicted RBP3.5□□□□□ -1.85
BUD21YOR078W TAF2P23255 1407 aa3.5□□□□□ -1.85
BUD21YOR078W SPT6P23615 1451 aaKnown RBP3.49□□□□□ -1.85
BUD21YOR078W TOP1P04786 769 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms