RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C CWC2Q12046 339 aaPredicted RBP2.64□□□□□ -1.99
SHE2YKL130C PSF3Q12146 194 aa2.64□□□□□ -1.99
SHE2YKL130C ARP7Q12406 477 aa2.64□□□□□ -1.99
SHE2YKL130C CDC26P14724 124 aa2.63□□□□□ -1.99
SHE2YKL130C APA1P16550 321 aaKnown RBP2.63□□□□□ -1.99
SHE2YKL130C CAP1P28495 268 aaKnown RBP2.63□□□□□ -1.99
SHE2YKL130C MGM1P32266 881 aa2.63□□□□□ -1.99
SHE2YKL130C MF(ALPHA)2P32435 120 aa2.63□□□□□ -1.99
SHE2YKL130C HXT4P32467 576 aa2.63□□□□□ -1.99
SHE2YKL130C EXO84P38261 753 aa2.63□□□□□ -1.99
SHE2YKL130C YMR124WP39523 943 aaKnown RBP2.63□□□□□ -1.99
SHE2YKL130C YIL024CP40543 189 aa2.63□□□□□ -1.99
SHE2YKL130C IES1P43579 692 aa2.63□□□□□ -1.99
SHE2YKL130C IRC5P43610 853 aa2.63□□□□□ -1.99
SHE2YKL130C IML2P47031 731 aa2.63□□□□□ -1.99
SHE2YKL130C PUS4P48567 403 aaKnown RBP2.63□□□□□ -1.99
SHE2YKL130C CEG1Q01159 459 aaPredicted RBP2.63□□□□□ -1.99
SHE2YKL130C MTD1Q02046 320 aaKnown RBP2.63□□□□□ -1.99
SHE2YKL130C YML131WQ03102 365 aa2.63□□□□□ -1.99
SHE2YKL130C COG4Q06096 861 aa2.63□□□□□ -1.99
SHE2YKL130C HIM1Q06674 414 aa2.63□□□□□ -1.99
SHE2YKL130C BRE1Q07457 700 aaKnown RBP2.63□□□□□ -1.99
SHE2YKL130C NUR1Q12066 484 aa2.63□□□□□ -1.99
SHE2YKL130C YEL076C-AP0CX16 216 aa2.62□□□□□ -1.99
SHE2YKL130C YLR464WP0CX17 216 aa2.62□□□□□ -1.99
SHE2YKL130C NOP1P15646 327 aaKnown RBP2.62□□□□□ -1.99
SHE2YKL130C SEC18P18759 758 aaKnown RBP2.62□□□□□ -1.99
SHE2YKL130C RPN12P32496 274 aa2.62□□□□□ -1.99
SHE2YKL130C TGL1P34163 548 aa2.62□□□□□ -1.99
SHE2YKL130C CCL1P37366 393 aa2.62□□□□□ -1.99
SHE2YKL130C CDS1P38221 457 aa2.62□□□□□ -1.99
SHE2YKL130C NOC2P39744 710 aaKnown RBP2.62□□□□□ -1.99
SHE2YKL130C YEL076CP39971 216 aa2.62□□□□□ -1.99
SHE2YKL130C EAF5P39995 279 aa2.62□□□□□ -1.99
SHE2YKL130C YAT2P40017 923 aa2.62□□□□□ -1.99
SHE2YKL130C FAF1P40546 346 aaPredicted RBP2.62□□□□□ -1.99
SHE2YKL130C NSE5Q03718 556 aa2.62□□□□□ -1.99
SHE2YKL130C BLS1Q06071 122 aa2.62□□□□□ -1.99
SHE2YKL130C OPY2Q06810 360 aa2.62□□□□□ -1.99
SHE2YKL130C AIM41Q12032 185 aa2.62□□□□□ -1.99
SHE2YKL130C SSM4P40318 1319 aa2.62□□□□□ -1.99
SHE2YKL130C BI2P03873 423 aa2.61□□□□□ -1.99
SHE2YKL130C VAS1P07806 1104 aaKnown RBP2.61□□□□□ -1.99
SHE2YKL130C GFD2P25370 566 aaKnown RBP2.61□□□□□ -1.99
SHE2YKL130C APM3P38153 483 aa2.61□□□□□ -1.99
SHE2YKL130C EHT1P38295 451 aa2.61□□□□□ -1.99
SHE2YKL130C YHR033WP38690 423 aa2.61□□□□□ -1.99
SHE2YKL130C FLO5P38894 1075 aa2.61□□□□□ -1.99
SHE2YKL130C SCS2P40075 244 aaKnown RBP2.61□□□□□ -1.99
SHE2YKL130C PRM2P40534 656 aa2.61□□□□□ -1.99
SHE2YKL130C TDA10P42938 290 aa2.61□□□□□ -1.99
SHE2YKL130C TRS130Q03660 1102 aa2.61□□□□□ -1.99
SHE2YKL130C SPN1Q06505 410 aaPredicted RBP2.61□□□□□ -1.99
SHE2YKL130C VPS5Q92331 675 aa2.61□□□□□ -1.99
SHE2YKL130C HSC82P15108 705 aaKnown RBP2.6□□□□□ -1.99
SHE2YKL130C CBP3P21560 335 aa2.6□□□□□ -1.99
SHE2YKL130C RER1P25560 188 aa2.6□□□□□ -1.99
SHE2YKL130C XRS2P33301 854 aa2.6□□□□□ -1.99
SHE2YKL130C MFT1P33441 392 aaKnown RBP2.6□□□□□ -1.99
SHE2YKL130C YPT10P38146 199 aa2.6□□□□□ -1.99
SHE2YKL130C PSY4P38193 441 aa2.6□□□□□ -1.99
SHE2YKL130C SWD1P39706 426 aa2.6□□□□□ -1.99
SHE2YKL130C RPT2P40327 437 aaKnown RBP2.6□□□□□ -1.99
SHE2YKL130C RAD26P40352 1085 aa2.6□□□□□ -1.99
SHE2YKL130C IRC7P43623 340 aa2.6□□□□□ -1.99
SHE2YKL130C SAE2P46946 345 aa2.6□□□□□ -1.99
SHE2YKL130C COP1P53622 1201 aaKnown RBP2.6□□□□□ -1.99
SHE2YKL130C YMR018WQ04364 514 aa2.6□□□□□ -1.99
SHE2YKL130C TRI1Q05024 226 aa2.6□□□□□ -1.99
SHE2YKL130C YCG1Q06680 1035 aa2.6□□□□□ -1.99
SHE2YKL130C SNA4Q07549 140 aa2.6□□□□□ -1.99
SHE2YKL130C SSP2Q08646 371 aa2.6□□□□□ -1.99
SHE2YKL130C BUD7Q08754 746 aa2.6□□□□□ -1.99
SHE2YKL130C PCL8Q08966 492 aa2.6□□□□□ -1.99
SHE2YKL130C RRI2Q12348 645 aa2.6□□□□□ -1.99
SHE2YKL130C AHA1Q12449 350 aaKnown RBP2.6□□□□□ -1.99
SHE2YKL130C MIS1P09440 975 aaKnown RBP2.59□□□□□ -1.99
SHE2YKL130C YER190C-BP0CX94 160 aa2.59□□□□□ -1.99
SHE2YKL130C YEL077W-AP0CX95 160 aa2.59□□□□□ -1.99
SHE2YKL130C YGR296C-BP0CX96 160 aa2.59□□□□□ -1.99
SHE2YKL130C YPL283W-BP0CX97 160 aa2.59□□□□□ -1.99
SHE2YKL130C YPR204C-AP0CX98 160 aa2.59□□□□□ -1.99
SHE2YKL130C ADH4P10127 382 aa2.59□□□□□ -1.99
SHE2YKL130C CWH43P25618 953 aa2.59□□□□□ -1.99
SHE2YKL130C RRN3P36070 627 aa2.59□□□□□ -1.99
SHE2YKL130C MRPL36P36531 177 aa2.59□□□□□ -1.99
SHE2YKL130C YLF2P38746 405 aa2.59□□□□□ -1.99
SHE2YKL130C KAP123P40069 1113 aaKnown RBP2.59□□□□□ -1.99
SHE2YKL130C CFD1P40558 293 aa2.59□□□□□ -1.99
SHE2YKL130C MAD2P40958 196 aa2.59□□□□□ -1.99
SHE2YKL130C SMK1P41808 388 aa2.59□□□□□ -1.99
SHE2YKL130C ERR3P42222 437 aa2.59□□□□□ -1.99
SHE2YKL130C MAD3P47074 515 aa2.59□□□□□ -1.99
SHE2YKL130C MNT2P53059 558 aa2.59□□□□□ -1.99
SHE2YKL130C PEF1P53238 335 aa2.59□□□□□ -1.99
SHE2YKL130C SQS1P53866 767 aaKnown RBP2.59□□□□□ -1.99
SHE2YKL130C MOT3P54785 490 aaKnown RBP2.59□□□□□ -1.99
SHE2YKL130C GTR1Q00582 310 aa2.59□□□□□ -1.99
SHE2YKL130C CIA1Q05583 330 aa2.59□□□□□ -1.99
SHE2YKL130C HOS1Q12214 470 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms