RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	REI1	P38344	393 aa	Predicted RBP	13.14	□□□□□ -0.31
HOM6	YJR139C	GDH3	P39708	457 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	RGD2	P43556	714 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	AIM23	P47015	356 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	HLJ1	P48353	224 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	NIS1	P53939	407 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	PER33	Q12144	273 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	OCA6	Q12454	224 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	PEX11	Q12462	236 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	AI5_ALPHA	Q9ZZX1	630 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	FMP27	Q06179	2628 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	PAT1	P25644	796 aa	Known RBP	13.13	□□□□□ -0.31
HOM6	YJR139C	YJU3	P28321	313 aa		13.13	□□□□□ -0.31
HOM6	YJR139C	GCD6	P32501	712 aa	Known RBP	13.13	□□□□□ -0.31
HOM6	YJR139C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	not detected
HOM6	YJR139C	MMS21	P38632	267 aa		13.13	□□□□□ -0.31
HOM6	YJR139C	MND2	P40577	368 aa		13.13	□□□□□ -0.31
HOM6	YJR139C	RRN7	P40992	514 aa		13.13	□□□□□ -0.31
HOM6	YJR139C	ROK1	P45818	564 aa	Predicted RBP	13.13	□□□□□ -0.31
HOM6	YJR139C	TIM13	P53299	105 aa		13.13	□□□□□ -0.31
HOM6	YJR139C	ENT5	Q03769	411 aa	Known RBP	13.13	□□□□□ -0.31
HOM6	YJR139C	LCB5	Q06147	687 aa	Known RBP	13.13	□□□□□ -0.31
HOM6	YJR139C	CLP1	Q08685	445 aa	Predicted RBP	13.13	□□□□□ -0.31
HOM6	YJR139C	COX5A	P00424	153 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	SST2	P11972	698 aa	Known RBP	13.12	□□□□□ -0.31
HOM6	YJR139C	MRPL8	P22353	238 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	MIH1	P23748	554 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	CSE1	P33307	960 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	CKB2	P38930	258 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	MAD1	P40957	749 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	AIM14	P53109	570 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	NRT1	Q08485	598 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	PGC1	Q08959	321 aa		13.12	□□□□□ -0.31
HOM6	YJR139C	SEC63	P14906	663 aa		13.11	□□□□□ -0.31
HOM6	YJR139C	TYE7	P33122	291 aa	Predicted RBP	13.11	□□□□□ -0.31
HOM6	YJR139C	PXA2	P34230	853 aa		13.11	□□□□□ -0.31
HOM6	YJR139C	YBP1	P38315	674 aa		13.11	□□□□□ -0.31
HOM6	YJR139C	PPX1	P38698	397 aa		13.11	□□□□□ -0.31
HOM6	YJR139C	REF2	P42073	533 aa	Predicted RBP	13.11	□□□□□ -0.31
HOM6	YJR139C	PEX13	P80667	386 aa		13.11	□□□□□ -0.31
HOM6	YJR139C	ARP9	Q05123	467 aa		13.11	□□□□□ -0.31
HOM6	YJR139C	CDC24	P11433	854 aa	Predicted RBP	13.1	□□□□□ -0.31
HOM6	YJR139C	NPY1	P53164	384 aa		13.1	□□□□□ -0.31
HOM6	YJR139C	YTP1	P53584	459 aa		13.1	□□□□□ -0.31
HOM6	YJR139C	VTI1	Q04338	217 aa		13.1	□□□□□ -0.31
HOM6	YJR139C	YML053C	Q04978	212 aa		13.1	□□□□□ -0.31
HOM6	YJR139C	RAD3	P06839	778 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	UTR2	P32623	467 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	TGL4	P36165	910 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	VHC1	P38329	1120 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	YAT2	P40017	923 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	TDA7	P53882	636 aa	Predicted RBP	13.09	□□□□□ -0.31
HOM6	YJR139C	REG1	Q00816	1014 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	UTP6	Q02354	440 aa	Known RBP	13.09	□□□□□ -0.31
HOM6	YJR139C	APL5	Q08951	932 aa	Known RBP	13.09	□□□□□ -0.31
HOM6	YJR139C	MSB2	P32334	1306 aa		13.09	□□□□□ -0.31
HOM6	YJR139C	AAT2	P23542	418 aa	Known RBP	13.08	□□□□□ -0.32
HOM6	YJR139C	DPB3	P27344	201 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	PYC2	P32327	1180 aa	Known RBP	13.08	□□□□□ -0.32
HOM6	YJR139C	GCG1	P32656	232 aa	Known RBP	13.08	□□□□□ -0.32
HOM6	YJR139C	YHL041W	P38730	149 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	CCT4	P39078	528 aa	Known RBP	13.08	□□□□□ -0.32
HOM6	YJR139C	PAN6	P40459	309 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	ATG36	P46983	293 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	EMC4	P53073	190 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	PRM1	P53835	661 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	SMA1	Q02651	245 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	MSH6	Q03834	1242 aa		13.08	□□□□□ -0.32
HOM6	YJR139C	YEL043W	P32618	956 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	LIP5	P32875	414 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	TCD2	P36101	447 aa	Known RBP	13.07	□□□□□ -0.32
HOM6	YJR139C	BYE1	P36106	594 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	ECM2	P38241	364 aa	Known RBP	13.07	□□□□□ -0.32
HOM6	YJR139C	POP4	P38336	279 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	ELO3	P40319	345 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	SER33	P40510	469 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	NMD5	P46970	1048 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	CAF120	P53836	1060 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	ORC3	P54790	616 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	YMR160W	Q03823	816 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	CMS1	Q07897	291 aa	Known RBP	13.07	□□□□□ -0.32
HOM6	YJR139C	AVL9	Q12500	764 aa		13.07	□□□□□ -0.32
HOM6	YJR139C	QCR6	P00127	147 aa		13.06	□□□□□ -0.32
HOM6	YJR139C	GIP1	P38229	639 aa		13.06	□□□□□ -0.32
HOM6	YJR139C	IST3	P40565	148 aa	Predicted RBP	13.06	□□□□□ -0.32
HOM6	YJR139C	NUP84	P52891	726 aa		13.06	□□□□□ -0.32
HOM6	YJR139C	GND2	P53319	492 aa		13.06	□□□□□ -0.32
HOM6	YJR139C	RPL34A	P87262	121 aa	Predicted RBP	13.06	□□□□□ -0.32
HOM6	YJR139C	ACM1	Q08981	209 aa		13.06	□□□□□ -0.32
HOM6	YJR139C	LEU1	P07264	779 aa	Known RBP	13.05	□□□□□ -0.32
HOM6	YJR139C	SCH9	P11792	824 aa	Known RBP	13.05	□□□□□ -0.32
HOM6	YJR139C	RBK1	P25332	333 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	MGT1	P26188	188 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	PIK1	P39104	1066 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	GIP4	P39732	760 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	RAD26	P40352	1085 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	IML2	P47031	731 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	MNT2	P53059	558 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	TEP1	P53916	434 aa		13.05	□□□□□ -0.32
HOM6	YJR139C	SLU7	Q02775	382 aa	Known RBP	13.05	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms