RNA–Protein interactions for RNA: YJR099W

YUH1, Transcript of Ubiquitin C-terminal hydrolase, yeast

Gene YUH1, Length 711 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YUH1	YJR099W	SMK1	P41808	388 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	YJL043W	P47053	257 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	ATP23	P53722	227 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	STP1	Q00947	519 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	ORM2	Q06144	216 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	YDR056C	Q12025	205 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	AIM41	Q12032	185 aa		4.63	□□□□□ -1.67
YUH1	YJR099W	RTK1	Q12100	620 aa	Predicted RBP	4.63	□□□□□ -1.67
YUH1	YJR099W	WHI2	P12611	486 aa		4.62	□□□□□ -1.67
YUH1	YJR099W	MRPL9	P31334	269 aa		4.62	□□□□□ -1.67
YUH1	YJR099W	DHR2	P36009	735 aa	Predicted RBP	4.62	□□□□□ -1.67
YUH1	YJR099W	SSP120	P39931	234 aa	Known RBP	4.62	□□□□□ -1.67
YUH1	YJR099W	RAD26	P40352	1085 aa		4.62	□□□□□ -1.67
YUH1	YJR099W	YDL183C	P48569	320 aa		4.62	□□□□□ -1.67
YUH1	YJR099W	ESF2	P53743	316 aa	Known RBP	4.62	□□□□□ -1.67
YUH1	YJR099W	RPS15	Q01855	142 aa	Known RBP	4.62	□□□□□ -1.67
YUH1	YJR099W	MRPL13	Q02204	264 aa		4.62	□□□□□ -1.67
YUH1	YJR099W	HSC82	P15108	705 aa	Known RBP	4.61	□□□□□ -1.67
YUH1	YJR099W	MCM3	P24279	971 aa	Known RBP	4.61	□□□□□ -1.67
YUH1	YJR099W	FAF1	P40546	346 aa	Predicted RBP	4.61	□□□□□ -1.67
YUH1	YJR099W	MAD2	P40958	196 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	YFL015C	P43578	164 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	MEP3	P53390	489 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	MPS1	P54199	764 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	ARR3	Q06598	404 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	DIN7	Q12086	430 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	RTP1	Q12751	981 aa		4.61	□□□□□ -1.67
YUH1	YJR099W	HMG2	P12684	1045 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	RNR3	P21672	869 aa	Known RBP	4.6	□□□□□ -1.67
YUH1	YJR099W	RPC34	P32910	317 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	XRS2	P33301	854 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	SLC1	P33333	303 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	JNM1	P36224	373 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	KAP123	P40069	1113 aa	Known RBP	4.6	□□□□□ -1.67
YUH1	YJR099W	LRO1	P40345	661 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	IMA5	P40884	581 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	PSA1	P41940	361 aa	Known RBP	4.6	□□□□□ -1.67
YUH1	YJR099W	MNT2	P53059	558 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	SQS1	P53866	767 aa	Known RBP	4.6	□□□□□ -1.67
YUH1	YJR099W	GIR2	Q03768	265 aa	Predicted RBP	4.6	□□□□□ -1.67
YUH1	YJR099W	HOS1	Q12214	470 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	DBP10	Q12389	995 aa	Known RBP	4.6	□□□□□ -1.67
YUH1	YJR099W	VPS5	Q92331	675 aa		4.6	□□□□□ -1.67
YUH1	YJR099W	MIS1	P09440	975 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	POL3	P15436	1097 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	CLB4	P24871	460 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	CAP1	P28495	268 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	RMA1	P36001	430 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	EXO1	P39875	702 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	PUG1	P40100	303 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	NDE1	P40215	560 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	PSF2	P40359	213 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	SAP4	P53036	818 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	MDR1	P53258	950 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	CPR6	P53691	371 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	ARC35	P53731	342 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	YNR071C	P53757	342 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	TRI1	Q05024	226 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	TSR2	Q06672	205 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	GEP3	Q08622	556 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	TGS1	Q12052	315 aa		4.59	□□□□□ -1.67
YUH1	YJR099W	PRS5	Q12265	496 aa	Known RBP	4.59	□□□□□ -1.67
YUH1	YJR099W	NCP1	P16603	691 aa	Known RBP	4.58	□□□□□ -1.68
YUH1	YJR099W	YCL049C	P25577	312 aa		4.58	□□□□□ -1.68
YUH1	YJR099W	YPT10	P38146	199 aa		4.58	□□□□□ -1.68
YUH1	YJR099W	STT3	P39007	718 aa	Known RBP	4.58	□□□□□ -1.68
YUH1	YJR099W	IRC3	Q06683	689 aa		4.58	□□□□□ -1.68
YUH1	YJR099W	MED1	Q12321	566 aa		4.58	□□□□□ -1.68
YUH1	YJR099W	ENT1	Q12518	454 aa		4.58	□□□□□ -1.68
YUH1	YJR099W	SNF1	P06782	633 aa	Known RBP	4.57	□□□□□ -1.68
YUH1	YJR099W	CWH43	P25618	953 aa		4.57	□□□□□ -1.68
YUH1	YJR099W	LOT5	P34234	306 aa		4.57	□□□□□ -1.68
YUH1	YJR099W	CCL1	P37366	393 aa		4.57	□□□□□ -1.68
YUH1	YJR099W	PEF1	P53238	335 aa		4.57	□□□□□ -1.68
YUH1	YJR099W	ACS1	Q01574	713 aa		4.57	□□□□□ -1.68
YUH1	YJR099W	EIS1	Q05050	843 aa	Known RBP	4.57	□□□□□ -1.68
YUH1	YJR099W	IWR1	Q07532	353 aa	Predicted RBP	4.57	□□□□□ -1.68
YUH1	YJR099W	URA3	P03962	267 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	MTF2	P10849	440 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
YUH1	YJR099W	SIR1	P21691	654 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	UBC1	P21734	215 aa	Known RBP	4.56	□□□□□ -1.68
YUH1	YJR099W	IMP2'	P32351	346 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	RPT3	P33298	428 aa	Known RBP	4.56	□□□□□ -1.68
YUH1	YJR099W	MRPL36	P36531	177 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	YLF2	P38746	405 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	YJL193W	P39542	402 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	BST1	P43571	1029 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	NMD5	P46970	1048 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	SCS3	P53012	380 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	WAR1	Q03631	944 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	GFD1	Q04839	188 aa	Known RBP	4.56	□□□□□ -1.68
YUH1	YJR099W	AAD4	Q07747	329 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	CIR2	Q08822	631 aa		4.56	□□□□□ -1.68
YUH1	YJR099W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
YUH1	YJR099W	YMR084W	A2P2R3	262 aa		4.55	□□□□□ -1.68
YUH1	YJR099W	PCK1	P10963	549 aa		4.55	□□□□□ -1.68
YUH1	YJR099W	VPS33	P20795	691 aa		4.55	□□□□□ -1.68
YUH1	YJR099W	ECM32	P32644	1121 aa	Known RBP	4.55	□□□□□ -1.68
YUH1	YJR099W	MUD2	P36084	527 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms