RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	DXO1	Q06349	442 aa		5.54	□□□□□ -1.52
VTC2	YFL004W	TRE1	Q08919	783 aa		5.54	□□□□□ -1.52
VTC2	YFL004W	HRT3	Q12347	344 aa		5.54	□□□□□ -1.52
VTC2	YFL004W	NSI1	Q12457	570 aa		5.54	□□□□□ -1.52
VTC2	YFL004W	PUP1	P25043	261 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	YDJ1	P25491	409 aa	Known RBP	5.53	□□□□□ -1.52
VTC2	YFL004W	PEX3	P28795	441 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	VMA6	P32366	345 aa	Known RBP	5.53	□□□□□ -1.52
VTC2	YFL004W	RFS1	P38234	210 aa	Known RBP	5.53	□□□□□ -1.52
VTC2	YFL004W	FET5	P43561	622 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	MRK1	P50873	501 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	YGR125W	P53273	1036 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	RAX1	Q08760	435 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	TCO89	Q08921	799 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	RRP36	Q12481	300 aa	Predicted RBP	5.53	□□□□□ -1.52
VTC2	YFL004W	CCP1	P00431	361 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	CIT1	P00890	479 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	KSS1	P14681	368 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	VPS33	P20795	691 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	SPR1	P32603	445 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	ATP3	P38077	311 aa	Known RBP	5.53	□□□□□ -1.52
VTC2	YFL004W	YBR225W	P38321	900 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	SDH8	P38345	138 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	GLO3	P38682	493 aa	Known RBP	5.53	□□□□□ -1.52
VTC2	YFL004W	STP2	P38704	541 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	SMF2	P38778	549 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	PSF2	P40359	213 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	RIM21	P48565	533 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	YET2	Q04210	160 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	MRX10	Q05648	414 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	FMP45	Q07651	309 aa		5.53	□□□□□ -1.52
VTC2	YFL004W	CKA2	P19454	339 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	MGT1	P26188	188 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	SBA1	P28707	216 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	NUP2	P32499	720 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	SRP101	P32916	621 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	TYE7	P33122	291 aa	Predicted RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	MDJ1	P35191	511 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	RDH54	P38086	958 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	INP51	P40559	946 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	MYO5	Q04439	1219 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	HEL2	Q05580	639 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	YLR297W	Q05899	129 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	THI20	Q08224	551 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	FLC1	Q08967	793 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	FAL1	Q12099	399 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	YBR298C-A	Q8TGK4	73 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	IPP1	P00817	287 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	YEL076C-A	P0CX16	216 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	YLR464W	P0CX17	216 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	DBF4	P32325	704 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	IRE1	P32361	1115 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	SSE2	P32590	693 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	MUD1	P32605	298 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	PEX2	P32800	271 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	LRG1	P35688	1017 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	DUG2	P38149	878 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	NCL1	P38205	684 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	RSC30	P38781	883 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	YDR089W	P38966	869 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	YEL076C	P39971	216 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	GLG2	P47011	380 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	RSM26	P47141	266 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	MET13	P53128	600 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	BNI5	P53890	448 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	CBK1	P53894	756 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	RSC9	Q03124	581 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	ECM11	Q04110	302 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	YML083C	Q04526	418 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.52	□□□□□ -1.53	not detected
VTC2	YFL004W	PCL8	Q08966	492 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	THP3	Q12049	470 aa	Known RBP	5.52	□□□□□ -1.53
VTC2	YFL004W	MED2	Q12124	431 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	LDB17	Q12342	491 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	GRX6	Q12438	231 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	FMP16	Q12497	93 aa		5.52	□□□□□ -1.53
VTC2	YFL004W	RHO1	P06780	209 aa	Known RBP	5.51	□□□□□ -1.53
VTC2	YFL004W	NFT1	P0CE68	1218 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	TRK2	P28584	889 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	NAT2	P37293	288 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	FAA2	P39518	744 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	MEF2	P39677	819 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	YJL070C	P40361	888 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	CHS6	P40955	746 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	ELP2	P42935	788 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	APS3	P47064	194 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	YJR098C	P47139	656 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	BPL1	P48445	690 aa	Predicted RBP	5.51	□□□□□ -1.53
VTC2	YFL004W	ALT1	P52893	592 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	NOP19	P53317	196 aa	Predicted RBP	5.51	□□□□□ -1.53
VTC2	YFL004W	MRPL50	P53724	139 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	VAC7	P53950	1165 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	MRPL13	Q02204	264 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	MUK1	Q02866	612 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	JIP4	Q03361	876 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	ATG16	Q03818	150 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	YOR289W	Q12012	251 aa	Predicted RBP	5.51	□□□□□ -1.53
VTC2	YFL004W	CDC19	P00549	500 aa	Known RBP	5.51	□□□□□ -1.53
VTC2	YFL004W	DAP2	P18962	818 aa		5.51	□□□□□ -1.53
VTC2	YFL004W	SFL1	P20134	766 aa		5.51	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms