RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	MRPL10	P36520	322 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	KAP104	P38217	918 aa	Known RBP	6.6	□□□□□ -1.35
CDC1	YDR182W	YHR078W	P38799	552 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	PFS1	P38872	237 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	ATG3	P40344	310 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	TFG2	P41896	400 aa	Predicted RBP	6.6	□□□□□ -1.35
CDC1	YDR182W	RRT5	P43607	289 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	MRX6	P48564	524 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	AIM14	P53109	570 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	CDC55	Q00362	526 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	YDR278C	Q05612	105 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	YPK1	P12688	680 aa	Known RBP	6.6	□□□□□ -1.35
CDC1	YDR182W	YEL028W	P39989	153 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	ASG1	P40467	964 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	RPA14	P50106	137 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	KXD1	P53158	218 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	COG7	P53195	279 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	SNO2	P53823	222 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	PRM1	P53835	661 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	YNL040W	P53960	456 aa	Predicted RBP	6.6	□□□□□ -1.35
CDC1	YDR182W	INP2	Q03824	705 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	OPT2	Q06593	877 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	RTK1	Q12100	620 aa	Predicted RBP	6.6	□□□□□ -1.35
CDC1	YDR182W	PEX11	Q12462	236 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	NAG1	Q8TGN9	163 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	AFI1	Q99222	893 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	LEU1	P07264	779 aa	Known RBP	6.59	□□□□□ -1.36
CDC1	YDR182W	SST2	P11972	698 aa	Known RBP	6.59	□□□□□ -1.36
CDC1	YDR182W	KAR9	P32526	644 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	OCA5	P38738	679 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	FAA3	P39002	694 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	PAN6	P40459	309 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	RPS10B	P46784	105 aa	Known RBP	6.59	□□□□□ -1.36
CDC1	YDR182W	YGL140C	P53120	1219 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	EAF1	Q06337	982 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	RPS10A	Q08745	105 aa	Predicted RBP	6.59	□□□□□ -1.36
CDC1	YDR182W	CIR2	Q08822	631 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	IZH4	Q99393	312 aa		6.59	□□□□□ -1.36
CDC1	YDR182W	ADE3	P07245	946 aa	Known RBP	6.58	□□□□□ -1.36
CDC1	YDR182W	CLC1	P17891	233 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	SNF5	P18480	905 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	MRPL8	P22353	238 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	APM3	P38153	483 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	TAE1	P38340	232 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	SET5	P38890	526 aa	Known RBP	6.58	□□□□□ -1.36
CDC1	YDR182W	MNT2	P53059	558 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	YGR127W	P53275	312 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	TIM13	P53299	105 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
CDC1	YDR182W	NOG2	P53742	486 aa	Known RBP	6.58	□□□□□ -1.36
CDC1	YDR182W	VAC7	P53950	1165 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	YAT1	P80235	687 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	IVY1	Q04934	453 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	SWC7	Q06707	132 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	ALR1	Q08269	859 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	SAM4	Q08985	325 aa	Known RBP	6.58	□□□□□ -1.36
CDC1	YDR182W	Q0182	Q9ZZW1	134 aa		6.58	□□□□□ -1.36
CDC1	YDR182W	POL2	P21951	2222 aa	Known RBP	6.57	□□□□□ -1.36
CDC1	YDR182W	MIH1	P23748	554 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	RRP43	P25359	394 aa	Predicted RBP	6.57	□□□□□ -1.36
CDC1	YDR182W	MEI4	P29467	408 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	DBF4	P32325	704 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	TYE7	P33122	291 aa	Predicted RBP	6.57	□□□□□ -1.36
CDC1	YDR182W	HIS2	P38635	335 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	ATM1	P40416	690 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	DUG1	P43616	481 aa	Known RBP	6.57	□□□□□ -1.36
CDC1	YDR182W	NBP35	P52920	328 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	YGR021W	P53212	290 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	YNL108C	P53929	270 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	REG1	Q00816	1014 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	SYH1	Q02875	849 aa	Known RBP	6.57	□□□□□ -1.36
CDC1	YDR182W	YMR018W	Q04364	514 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	GRX8	Q05926	109 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	YFT2	Q06676	274 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	OPY2	Q06810	360 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	YPR097W	Q06839	1073 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	APL4	Q12028	832 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	EFG1	Q3E705	233 aa	Known RBP	6.57	□□□□□ -1.36
CDC1	YDR182W	YEL077C	Q3E7X8	1277 aa		6.57	□□□□□ -1.36
CDC1	YDR182W	COX3	P00420	269 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	MOD5	P07884	428 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	MIS1	P09440	975 aa	Known RBP	6.56	□□□□□ -1.36
CDC1	YDR182W	MCM2	P29469	868 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	PMI40	P29952	429 aa	Known RBP	6.56	□□□□□ -1.36
CDC1	YDR182W	LIP5	P32875	414 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	PMT1	P33775	817 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	BIT2	P38346	545 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	ERP2	P39704	215 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	LTP1	P40347	161 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	RAD26	P40352	1085 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	DLD2	P46681	530 aa	Known RBP	6.56	□□□□□ -1.36
CDC1	YDR182W	MNN11	P46985	422 aa	Known RBP	6.56	□□□□□ -1.36
CDC1	YDR182W	BRO1	P48582	844 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	JJJ1	P53863	590 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	ERG5	P54781	538 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	ORC3	P54790	616 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	UFO1	Q04511	668 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	ERV41	Q04651	352 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	YDL073W	Q07454	984 aa		6.56	□□□□□ -1.36
CDC1	YDR182W	YLR001C	Q07895	862 aa		6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 114.7 ms