RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C GFD1Q04839 188 aaKnown RBP2.09□□□□□ -2.07
SWI5YDR146C SPN1Q06505 410 aaPredicted RBP2.09□□□□□ -2.07
SWI5YDR146C YDL242WQ07746 117 aa2.09□□□□□ -2.07
SWI5YDR146C AI5_ALPHAQ9ZZX1 630 aa2.09□□□□□ -2.07
SWI5YDR146C ADE3P07245 946 aaKnown RBP2.09□□□□□ -2.08
SWI5YDR146C POL3P15436 1097 aa2.09□□□□□ -2.08
SWI5YDR146C NCP1P16603 691 aaKnown RBP2.09□□□□□ -2.08
SWI5YDR146C RIT1P23796 513 aa2.09□□□□□ -2.08
SWI5YDR146C GEX2P36173 615 aa2.09□□□□□ -2.08
SWI5YDR146C SAE2P46946 345 aa2.09□□□□□ -2.08
SWI5YDR146C TAN1P53072 289 aaPredicted RBP2.09□□□□□ -2.08
SWI5YDR146C TAM41P53230 385 aa2.09□□□□□ -2.08
SWI5YDR146C FMP30Q02883 468 aa2.09□□□□□ -2.08
SWI5YDR146C CRF1Q04930 467 aa2.09□□□□□ -2.08
SWI5YDR146C MRI1Q06489 411 aaKnown RBP2.09□□□□□ -2.08
SWI5YDR146C SUL2Q12325 893 aa2.09□□□□□ -2.08
SWI5YDR146C YBR255C-AQ3E776 120 aa2.09□□□□□ -2.08
SWI5YDR146C YNL162W-AQ3E7A8 72 aa2.09□□□□□ -2.08
SWI5YDR146C HEM1P09950 548 aaPredicted RBP2.08□□□□□ -2.08
SWI5YDR146C MSM1P22438 575 aa2.08□□□□□ -2.08
SWI5YDR146C RRP43P25359 394 aaPredicted RBP2.08□□□□□ -2.08
SWI5YDR146C YCL049CP25577 312 aa2.08□□□□□ -2.08
SWI5YDR146C YPT53P36019 220 aa2.08□□□□□ -2.08
SWI5YDR146C ERC1P38767 581 aa2.08□□□□□ -2.08
SWI5YDR146C MAM1P40065 302 aa2.08□□□□□ -2.08
SWI5YDR146C OPT1P40897 799 aa2.08□□□□□ -2.08
SWI5YDR146C TAX4P47030 604 aa2.08□□□□□ -2.08
SWI5YDR146C RAD34Q06665 692 aa2.08□□□□□ -2.08
SWI5YDR146C HIM1Q06674 414 aa2.08□□□□□ -2.08
SWI5YDR146C CYK3Q07533 885 aa2.08□□□□□ -2.08
SWI5YDR146C YLR111WQ12528 110 aa2.08□□□□□ -2.08
SWI5YDR146C YER175W-AQ8TGU4 54 aa2.08□□□□□ -2.08
SWI5YDR146C SES1P07284 462 aaKnown RBP2.08□□□□□ -2.08
SWI5YDR146C MTF2P10849 440 aa2.08□□□□□ -2.08
SWI5YDR146C SEC18P18759 758 aaKnown RBP2.08□□□□□ -2.08
SWI5YDR146C MAK32P23060 363 aa2.08□□□□□ -2.08
SWI5YDR146C ARP2P32381 391 aaKnown RBP2.08□□□□□ -2.08
SWI5YDR146C PEX2P32800 271 aa2.08□□□□□ -2.08
SWI5YDR146C RPC34P32910 317 aa2.08□□□□□ -2.08
SWI5YDR146C KES1P35844 434 aaKnown RBP2.08□□□□□ -2.08
SWI5YDR146C VPS24P36095 224 aaKnown RBP2.08□□□□□ -2.08
SWI5YDR146C CAB2P40506 365 aa2.08□□□□□ -2.08
SWI5YDR146C UBP16Q02863 499 aa2.08□□□□□ -2.08
SWI5YDR146C PRS5Q12265 496 aaKnown RBP2.08□□□□□ -2.08
SWI5YDR146C FRE7Q12333 620 aa2.08□□□□□ -2.08
SWI5YDR146C CTT1P06115 562 aa2.07□□□□□ -2.08
SWI5YDR146C HOM2P13663 365 aaKnown RBP2.07□□□□□ -2.08
SWI5YDR146C PWP2P25635 923 aaKnown RBP2.07□□□□□ -2.08
SWI5YDR146C MSH1P25846 959 aa2.07□□□□□ -2.08
SWI5YDR146C URK1P27515 501 aa2.07□□□□□ -2.08
SWI5YDR146C FUI1P38196 639 aa2.07□□□□□ -2.08
SWI5YDR146C FSH1P38777 243 aaKnown RBP2.07□□□□□ -2.08
SWI5YDR146C UBP7P40453 1071 aa2.07□□□□□ -2.08
SWI5YDR146C ERR3P42222 437 aa2.07□□□□□ -2.08
SWI5YDR146C GTB1Q04924 702 aa2.07□□□□□ -2.08
SWI5YDR146C VAM6Q07468 1049 aa2.07□□□□□ -2.08
SWI5YDR146C SLK19Q08581 821 aaKnown RBP2.07□□□□□ -2.08
SWI5YDR146C RDL1Q12305 139 aaKnown RBP2.07□□□□□ -2.08
SWI5YDR146C AHA1Q12449 350 aaKnown RBP2.07□□□□□ -2.08
SWI5YDR146C PGK1P00560 416 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C MIS1P09440 975 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C PHO81P17442 1178 aa2.06□□□□□ -2.08
SWI5YDR146C PDE1P22434 369 aa2.06□□□□□ -2.08
SWI5YDR146C MRPL9P31334 269 aa2.06□□□□□ -2.08
SWI5YDR146C DBF20P32328 564 aa2.06□□□□□ -2.08
SWI5YDR146C SAP1P39955 897 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C LAS21P40367 830 aa2.06□□□□□ -2.08
SWI5YDR146C COG2P53271 262 aa2.06□□□□□ -2.08
SWI5YDR146C RTS3P53289 263 aa2.06□□□□□ -2.08
SWI5YDR146C LGE1Q02796 332 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C PLM2Q04383 521 aa2.06□□□□□ -2.08
SWI5YDR146C BSP1Q06604 576 aa2.06□□□□□ -2.08
SWI5YDR146C YPL191CQ08930 360 aa2.06□□□□□ -2.08
SWI5YDR146C CET1O13297 549 aaPredicted RBP2.06□□□□□ -2.08
SWI5YDR146C PET122P10355 254 aa2.06□□□□□ -2.08
SWI5YDR146C PHM8P40025 321 aa2.06□□□□□ -2.08
SWI5YDR146C VPS27P40343 622 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C BNA1P47096 177 aa2.06□□□□□ -2.08
SWI5YDR146C NPA3P47122 385 aa2.06□□□□□ -2.08
SWI5YDR146C BPL1P48445 690 aaPredicted RBP2.06□□□□□ -2.08
SWI5YDR146C YPL108WQ02872 168 aaPredicted RBP2.06□□□□□ -2.08
SWI5YDR146C TRS130Q03660 1102 aa2.06□□□□□ -2.08
SWI5YDR146C ARA2Q04212 335 aa2.06□□□□□ -2.08
SWI5YDR146C THI7Q05998 598 aa2.06□□□□□ -2.08
SWI5YDR146C LYS21Q12122 440 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C PNO1Q99216 274 aaKnown RBP2.06□□□□□ -2.08
SWI5YDR146C YML003WP0CF16 290 aa2.05□□□□□ -2.08
SWI5YDR146C ERG11P10614 530 aa2.05□□□□□ -2.08
SWI5YDR146C PCT1P13259 424 aa2.05□□□□□ -2.08
SWI5YDR146C CLB4P24871 460 aa2.05□□□□□ -2.08
SWI5YDR146C GSH1P32477 678 aa2.05□□□□□ -2.08
SWI5YDR146C ORC2P32833 620 aa2.05□□□□□ -2.08
SWI5YDR146C HES1P35843 434 aa2.05□□□□□ -2.08
SWI5YDR146C EXO84P38261 753 aa2.05□□□□□ -2.08
SWI5YDR146C APD1P38281 316 aa2.05□□□□□ -2.08
SWI5YDR146C VBA2P38358 474 aaKnown RBP2.05□□□□□ -2.08
SWI5YDR146C NPR3P38742 1146 aa2.05□□□□□ -2.08
SWI5YDR146C SAP185P40856 1058 aa2.05□□□□□ -2.08
SWI5YDR146C CIR1P42940 261 aa2.05□□□□□ -2.08
SWI5YDR146C YJL043WP47053 257 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms