RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W GUP2Q08929 609 aa5.71□□□□□ -1.49
FOB1YDR110W YPL277CQ08989 487 aa5.71□□□□□ -1.49
FOB1YDR110W LDB17Q12342 491 aa5.71□□□□□ -1.49
FOB1YDR110W RTC1Q08281 1341 aa5.71□□□□□ -1.5
FOB1YDR110W TY3B-GQ99315 1547 aa5.71□□□□□ -1.5
FOB1YDR110W HVG1P0CE11 249 aa5.71□□□□□ -1.5
FOB1YDR110W RPL19AP0CX82 189 aaKnown RBP5.71□□□□□ -1.5
FOB1YDR110W RPL19BP0CX83 189 aaPredicted RBP5.71□□□□□ -1.5
FOB1YDR110W FUS3P16892 353 aaKnown RBP5.71□□□□□ -1.5
FOB1YDR110W EST1P17214 699 aaPredicted RBP5.71□□□□□ -1.5
FOB1YDR110W MDH1P17505 334 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
FOB1YDR110W MSN1P22148 382 aa5.71□□□□□ -1.5
FOB1YDR110W STE13P33894 931 aa5.71□□□□□ -1.5
FOB1YDR110W ERT1P38140 529 aa5.71□□□□□ -1.5
FOB1YDR110W TDA3P38758 523 aa5.71□□□□□ -1.5
FOB1YDR110W SMF2P38778 549 aa5.71□□□□□ -1.5
FOB1YDR110W LYS9P38999 446 aa5.71□□□□□ -1.5
FOB1YDR110W EAF5P39995 279 aa5.71□□□□□ -1.5
FOB1YDR110W LRO1P40345 661 aa5.71□□□□□ -1.5
FOB1YDR110W YIL089WP40500 205 aa5.71□□□□□ -1.5
FOB1YDR110W SMC3P47037 1230 aa5.71□□□□□ -1.5
FOB1YDR110W KTR6P54070 446 aa5.71□□□□□ -1.5
FOB1YDR110W BOP2Q06150 570 aa5.71□□□□□ -1.5
FOB1YDR110W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
FOB1YDR110W TLG2Q08144 397 aa5.71□□□□□ -1.5
FOB1YDR110W MCH5Q08777 521 aa5.71□□□□□ -1.5
FOB1YDR110W RPN5Q12250 445 aaKnown RBP5.71□□□□□ -1.5
FOB1YDR110W CAT8P39113 1433 aa5.7□□□□□ -1.5
FOB1YDR110W HXK2P04807 486 aaKnown RBP5.7□□□□□ -1.5
FOB1YDR110W PET494P07390 489 aaPredicted RBP5.7□□□□□ -1.5
FOB1YDR110W YML002WP0CF17 737 aa5.7□□□□□ -1.5
FOB1YDR110W ADH4P10127 382 aa5.7□□□□□ -1.5
FOB1YDR110W RAP1P11938 827 aa5.7□□□□□ -1.5
FOB1YDR110W MSS116P15424 664 aaKnown RBP5.7□□□□□ -1.5
FOB1YDR110W EMC1P25574 760 aa5.7□□□□□ -1.5
FOB1YDR110W SAC6P32599 642 aaKnown RBP5.7□□□□□ -1.5
FOB1YDR110W YKL107WP34251 309 aa5.7□□□□□ -1.5
FOB1YDR110W SQT1P35184 431 aa5.7□□□□□ -1.5
FOB1YDR110W OAF3P36023 863 aa5.7□□□□□ -1.5
FOB1YDR110W TPO5P36029 618 aa5.7□□□□□ -1.5
FOB1YDR110W YCK3P39962 524 aa5.7□□□□□ -1.5
FOB1YDR110W PSF2P40359 213 aa5.7□□□□□ -1.5
FOB1YDR110W VNX1P42839 908 aa5.7□□□□□ -1.5
FOB1YDR110W ABM1P47146 123 aa5.7□□□□□ -1.5
FOB1YDR110W REG1Q00816 1014 aa5.7□□□□□ -1.5
FOB1YDR110W EGD1Q02642 157 aaKnown RBP5.7□□□□□ -1.5
FOB1YDR110W SAM3Q08986 587 aa5.7□□□□□ -1.5
FOB1YDR110W SEC3P33332 1336 aaKnown RBP5.7□□□□□ -1.5
FOB1YDR110W LAM4P38800 1345 aa5.7□□□□□ -1.5
FOB1YDR110W YRF1-4O13559 1382 aa5.7□□□□□ -1.5
FOB1YDR110W YBT1P32386 1661 aa5.69□□□□□ -1.5
FOB1YDR110W SEC7P11075 2009 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W TEF1P02994 458 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W CDC36P06100 191 aaPredicted RBP5.69□□□□□ -1.5
FOB1YDR110W SEC15P22224 910 aa5.69□□□□□ -1.5
FOB1YDR110W COT1P32798 439 aa5.69□□□□□ -1.5
FOB1YDR110W GPT2P36148 743 aa5.69□□□□□ -1.5
FOB1YDR110W SIC1P38634 284 aa5.69□□□□□ -1.5
FOB1YDR110W MSC7P38694 644 aa5.69□□□□□ -1.5
FOB1YDR110W KEL1P38853 1164 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W BEM4P39011 633 aa5.69□□□□□ -1.5
FOB1YDR110W MND2P40577 368 aa5.69□□□□□ -1.5
FOB1YDR110W ALK1P43633 760 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W DLD2P46681 530 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W PUS4P48567 403 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W ALT2P52892 507 aa5.69□□□□□ -1.5
FOB1YDR110W MIG2P53035 382 aa5.69□□□□□ -1.5
FOB1YDR110W RRP17Q04031 235 aaPredicted RBP5.69□□□□□ -1.5
FOB1YDR110W ERV41Q04651 352 aa5.69□□□□□ -1.5
FOB1YDR110W SKG3Q06315 1026 aa5.69□□□□□ -1.5
FOB1YDR110W YDR306CQ06640 478 aa5.69□□□□□ -1.5
FOB1YDR110W TCO89Q08921 799 aa5.69□□□□□ -1.5
FOB1YDR110W ARO1P08566 1588 aaKnown RBP5.69□□□□□ -1.5
FOB1YDR110W PRP22P24384 1145 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W ERV1P27882 189 aa5.68□□□□□ -1.5
FOB1YDR110W CAP1P28495 268 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W CCR4P31384 837 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W CDC12P32468 407 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W LIN1P38852 340 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W SAW1P39735 261 aa5.68□□□□□ -1.5
FOB1YDR110W SLN1P39928 1220 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W SIP5P40210 489 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W YRB2P40517 327 aa5.68□□□□□ -1.5
FOB1YDR110W SSU1P41930 458 aa5.68□□□□□ -1.5
FOB1YDR110W SIP4P46954 829 aa5.68□□□□□ -1.5
FOB1YDR110W BSC5P53755 489 aa5.68□□□□□ -1.5
FOB1YDR110W NGL1Q08213 363 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W RIO1Q12196 484 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W MRPL23Q12487 163 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W APM4Q99186 491 aa5.68□□□□□ -1.5
FOB1YDR110W STE12P13574 688 aa5.68□□□□□ -1.5
FOB1YDR110W CLB4P24871 460 aa5.68□□□□□ -1.5
FOB1YDR110W CDC15P27636 974 aa5.68□□□□□ -1.5
FOB1YDR110W MEI5P32489 222 aa5.68□□□□□ -1.5
FOB1YDR110W RSM22P36056 628 aa5.68□□□□□ -1.5
FOB1YDR110W SCS2P40075 244 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W GUS1P46655 708 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
FOB1YDR110W TOM22P49334 152 aa5.68□□□□□ -1.5
FOB1YDR110W CUE3P53137 624 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W PEX13P80667 386 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms